Magnetospirillum sp. XM-1: XM1_0586
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Entry
XM1_0586 CDS
T04231
Name
(GenBank) putative 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
magx
Magnetospirillum sp. XM-1
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
magx03016
]
XM1_0586
Enzymes [BR:
magx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
XM1_0586
Transfer RNA biogenesis [BR:
magx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
XM1_0586
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
CUW37655
UniProt:
A0A0U5HW38
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All DBs
Position
I:complement(555411..555947)
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AA seq
178 aa
AA seq
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MIRLFVGIGFDADLTARICRLQRGLPGARWTEPANLHLTLRFIGEVEEDLAEEIHHNLAA
LAEAPFALTLTGLGLFGDRHQAHTMWLGVERSDALSRLAARVDSAVVQAGAKPEPRKFNP
HVTLARLKDTPPGRLQDFIDATGHFREEHVAVERFTLFRSTLGRQGAQYDALEHYPLG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcctgttcgtcggcatcggcttcgacgcggatctgacggcgcgcatctgccgg
ctgcagcggggcctgcccggcgcccgctggaccgagcccgccaacctgcacctgacgctg
cgcttcatcggcgaggtggaagaagatttggccgaggagatccaccacaatctcgccgcc
ctggccgaggcgcccttcgccctgacgctgaccgggctgggcctgttcggcgaccgtcat
caggcccatacgatgtggctgggcgtcgagcgctccgacgccctgtcgcgccttgccgcc
cgcgtcgattccgccgtcgtgcaggcgggcgccaagcccgagccgcgcaagttcaatccc
cacgtcaccctggcccggctcaaggacaccccgccggggcggctgcaggatttcatcgac
gccaccggccatttccgcgaggagcatgtggcggtggagcgcttcaccctgtttcgcagc
acgctgggccgccagggcgcccaatacgacgcgctggagcattacccgctggggtga
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