Magnetospirillum sp. XM-1: XM1_0789
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Entry
XM1_0789 CDS
T04231
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx00300
Lysine biosynthesis
magx00470
D-Amino acid metabolism
magx01100
Metabolic pathways
magx01110
Biosynthesis of secondary metabolites
magx01120
Microbial metabolism in diverse environments
magx01230
Biosynthesis of amino acids
Module
magx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XM1_0789 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XM1_0789 (lysA)
Enzymes [BR:
magx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XM1_0789 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CUW37858
UniProt:
A0A0U5FMQ9
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Position
I:738196..739470
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AA seq
424 aa
AA seq
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MNHFHYSNGELFAEDVAIARIAREAGTPFYCYSTKTLERHYTVFAEALSAAGLDATICFA
LKSNPNVAVVRTFAQLGAGADVVSEGELRQALAAGVPPARIVFSGVGKTRHELEFAVAKG
IFQINVESEPELEMLSEIAAARGQVMPIAIRVNPDVDAGTHAKITTGKKENKFGIEWTRA
REVYARARALPGVEPVAVACHIGSQLTELAPFREAFLRVRDLVAMLRADGIDIRRLDLGG
GLGVPYDDETPPEPAAYAQVIKETLGDLGCRFVFEPGRLLVGNAGIMVSSIIRVKEGSTR
TFLIVDAAMNDLARPSLYDAYHSIFPVAEPKADAVLAEADVVGPVCETGDTFARQRRLPP
MRAGDLLAFGTAGAYGAAMSSTYNTRPLIPEVLVKGTEYAVIRARPSYEDMRSLESLPGW
LAEE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccattactccaacggcgagctgttcgccgaggacgtcgccatcgcccgc
atcgcccgcgaggccggcacgccgttctattgctattccaccaagaccctggagcggcac
tacaccgtgttcgccgaggcgctttccgctgccgggctggacgcgaccatctgcttcgcc
ctcaagtccaatcccaacgtggcggtggtccgcaccttcgcccaattgggggcaggcgcc
gacgtggtcagcgagggcgagctgcgccaggccctggctgccggcgtgccgccggcccgc
atcgtgttctcgggcgtgggcaagacccggcacgaactggaattcgccgtggccaagggc
atcttccagatcaacgtggaatccgagcccgagctggagatgctgtccgagatcgccgcc
gcccgcggccaggtgatgcccatcgccatccgggtcaatccggacgtggacgccggcacc
cacgccaagatcaccaccggcaagaaggaaaacaagttcggcatcgaatggacccgggcc
cgcgaggtctatgcccgcgcccgcgcgttgccgggcgtcgagccggtggccgtcgcctgc
catatcggctcgcagctgaccgagcttgcccccttccgcgaagccttcctgagggtgcgc
gacctggtggccatgctcagggccgacggcatcgacatccgccgcctggacctgggcggc
ggcctgggcgtgccctatgacgacgagaccccgcccgagcccgccgcctacgcgcaggtg
atcaaggaaaccctgggcgatctcggctgccgcttcgtcttcgagcccggccgcctgctg
gtgggcaatgccggcatcatggtgtcctccatcatccgggtgaaggagggcagcacgcgg
accttcctgattgtcgacgccgccatgaacgacctggcgcgaccctcgctctacgacgcc
taccactccatcttcccggtggccgagcccaaggccgacgccgtcctggccgaggcggac
gtggtcggcccggtgtgcgagaccggcgacaccttcgcgcgtcaacgccgcctgcccccc
atgcgggccggcgacctgctggccttcggcaccgccggagcctacggcgccgccatgtca
tccacctacaacacgcggccgctgattccggaagtgctggtcaaggggaccgaatacgcg
gtgatccgcgcccggcccagctatgaggacatgcgctccctggaaagcctgcccggatgg
ctggcggaggaatga
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