Magnetospirillum sp. XM-1: XM1_1256
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Entry
XM1_1256 CDS
T04231
Name
(GenBank) putative RNA (uracil-5)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
magx
Magnetospirillum sp. XM-1
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
magx03009
]
XM1_1256
Enzymes [BR:
magx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
XM1_1256
Ribosome biogenesis [BR:
magx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XM1_1256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Cons_hypoth95
MTS
Motif
Other DBs
NCBI-ProteinID:
CUW38325
UniProt:
A0A0U5MF79
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All DBs
Position
I:complement(1229737..1231053)
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AA seq
438 aa
AA seq
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MRKPRRAPPRSGRTSPAPRTVELSIEQVGARGDGIARLDAETVFVPFTVAGDKVLARVEG
KRGDGLTAALIEVTEPGPGRVAPPCAHYGRCGGCSLQHLDDALYAEWKRELLITQLARQG
LADAPVQPLMRIPPASRRRADFTFTRAKGGILLGFNGRASHTVIDIERCPLLDPALGDAL
PGLRRMLAGIAVEGGGEMIVTLTEGGLDVLVEAPARLDLFEREALAAAAESLDLARLHWR
RPGSGFVEPIARRRPALVRFGGIAVEPAPGAFLQPTRGGELAIAEAILAAIPGGVPVADL
YAGCGSFSLPLAQRGPVRAVEGEQGPVAALDAAARAAKLPLTTEVRDLARRPLAAHELKA
FRAVVLDPPRAGAAAQAAELARPSAGGPSTIAMVSCNPATLARDLRTLCDGGWRIEGISP
IDQFPWSAHLEAVATLRL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagccccgccgcgccccgccgcgttccggccggacgtcccccgccccgcgcacc
gtcgaactgagcatcgaacaggtgggagcgcgcggcgacggcatcgcccgcctggacgcg
gagacggtgttcgttcccttcacggtggccggcgacaaggtgctggcccgggtcgagggc
aagcggggcgacggcctgaccgccgccctgatcgaggtcaccgagcccggccccggccgc
gtcgccccaccctgcgcccattacggccgctgcggcggctgctcgctccagcatctggac
gacgccctttacgccgagtggaagcgcgagttgctgatcacccaactggcccgccagggt
cttgccgatgccccggtgcagccgctgatgcgcattccgcccgcctcgcggcggcgcgcc
gacttcaccttcacccgcgccaagggcggcatcctgctgggcttcaacggcagggccagc
cataccgtcatcgacatcgagcgctgcccgctgctcgaccccgccttaggggacgccctg
cccggcctgcgccgcatgctggccggcatcgccgtggagggcggcggcgagatgatcgtc
accctgaccgaaggcggcctggacgtgctggtggaagcgcccgcccgcctcgacctgttc
gagcgcgaggccctggcggcggcggcggaatccctggacctcgcccgcctgcactggcgc
aggccgggcagcggcttcgtcgagcccatcgcccggcgtcgcccggccctggtgcggttc
ggcggcatcgcggtcgaacccgcccccggcgccttcctgcagccgacccgcggcggcgag
ctggccatcgccgaagccatcctggccgccatcccggggggcgtgccggtggccgacctt
tatgccggctgcggcagcttcagcctgccgctggcccagcgcggaccggttcgcgccgtg
gaaggcgagcaggggccggtggcggcgctggacgccgccgcccgggccgcgaaactgccg
ctcaccaccgaggtgcgcgacctggcgcgccgccccctggcggcccatgagctgaaagcc
ttccgcgccgtggtgctggacccgccgcgggccggcgcagccgcccaggccgccgagttg
gcccgcccctcggccggaggaccttcgaccatcgccatggtgtcctgcaatcccgccacc
ctggcccgcgatctgcgcaccctttgcgatggcggctggcgcatcgaaggaatctctccc
atcgaccagttcccctggtccgctcatctggaagcggtggcgacccttcggttatga
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