Magnetospirillum sp. XM-1: XM1_1308
Help
Entry
XM1_1308 CDS
T04231
Symbol
trpB
Name
(GenBank) tryptophan synthase, beta subunit(Tryptophan synthase, beta chain,11-398)
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx00260
Glycine, serine and threonine metabolism
magx00400
Phenylalanine, tyrosine and tryptophan biosynthesis
magx01100
Metabolic pathways
magx01110
Biosynthesis of secondary metabolites
magx01230
Biosynthesis of amino acids
Module
magx_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XM1_1308 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
XM1_1308 (trpB)
Enzymes [BR:
magx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
XM1_1308 (trpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
CUW38377
UniProt:
A0A0U5HXU0
LinkDB
All DBs
Position
I:complement(1279205..1280428)
Genome browser
AA seq
407 aa
AA seq
DB search
MQSLNTYRAGPDERGHFGIFGGRYVAETLMPLILEVEKAYAAAKADPVFQAEFRSLLAQY
VGRPNPLYFARRLTQAFGGAKVFLKREDLNHTGAHKINNCIGQILLARRMGKQRIIAETG
AGQHGVATATVCALFGMQCVIYMGATDIERQMPNVYRMKLLGAEVKPVTAGAATLKDAMN
DALRDWVSNVADTYYLIGTVAGPHPYPAMVRDFQSVIGEEVRGQIMAAEGRLPDSLVACI
GGGSNAMGLFHPFLDDTSVRIIGVEAAGHGLDKLHAASLTGGKPGVLHGNRTYLLQDADG
QIAEAHSISAGLDYPGIGPEHSWLHETGRVEYVSVTDDEAVAAFQQCTRLEGIIPALESS
HAIAYAAKLAPTLPADHLMVVNLSGRGDKDVNTIAKALGDVHLGGLV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcctgaacacctatcgcgccggtcccgacgaacgcggacatttcggcatcttc
ggcggtcgctacgtggccgagacgctgatgcccctcatcctcgaggtggagaaggcttac
gcggcggccaaggccgatcccgtcttccaggccgagttccgctcgctgctggcccagtat
gtgggccgccccaatccgctgtatttcgcccgtcgcctgacccaggccttcggcggcgcc
aaggtgttcctgaagcgcgaggacctgaatcacaccggggcgcacaagatcaacaactgc
atcggccagatcctgctggcccggcgcatgggcaagcagcgcatcatcgccgagaccggg
gccggccagcacggggtggccaccgccaccgtctgcgccctgttcggcatgcaatgcgtc
atctacatgggcgccaccgacatcgagcggcagatgcccaacgtctaccgcatgaagctg
ctgggcgccgaagtgaagcccgtcaccgccggcgcggcgaccttgaaggacgccatgaac
gacgcgctcagggactgggtctccaacgtcgccgacacctattacctgatcggcaccgtg
gccgggccgcatccgtacccggccatggtccgcgacttccagtcggtgatcggcgaggaa
gtgcgcggccagatcatggccgccgagggccgcctgcccgattccctggtggcctgcatc
ggcggcggctccaacgccatgggcctgttccaccccttcctcgacgacaccagcgtgcgc
atcatcggcgtcgaagcggccggccacggcctggacaagctgcacgccgcgtccttgacc
ggcggcaagcccggcgtgctgcacggcaaccgcacctacctgctgcaggatgccgacggc
cagatcgccgaggcccactccatctcggcgggcctggactatcccggcatcgggcccgag
cattcctggctgcacgagaccggccgcgtggaatacgtctccgtcaccgatgacgaggcg
gtggccgccttccagcaatgcacgcggctggagggcatcattccggcgctggaatccagc
cacgccatcgcttacgccgccaagctggcccccaccctgcccgccgatcacctgatggtg
gtcaacctgtcggggcgcggcgacaaggacgtcaacaccatcgccaaggcgctgggcgac
gtgcatcttggggggctcgtctga
DBGET
integrated database retrieval system
