KEGG   Magnetospirillum sp. XM-1: XM1_2117
Entry
XM1_2117          CDS       T04231                                 
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
magx  Magnetospirillum sp. XM-1
Pathway
magx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:magx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    XM1_2117 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:magx03021]
    XM1_2117 (rpoA)
   03400 DNA repair and recombination proteins [BR:magx03400]
    XM1_2117 (rpoA)
Enzymes [BR:magx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     XM1_2117 (rpoA)
Transcription machinery [BR:magx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     XM1_2117 (rpoA)
DNA repair and recombination proteins [BR:magx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      XM1_2117 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD IDH
Other DBs
NCBI-ProteinID: CUW39186
UniProt: A0A0U5FS17
LinkDB
Position
I:2119240..2120256
AA seq 338 aa
MIQKNWQELIKPNKLHVEPGADAQRTATVVAEPLERGFGMTLGNSLRRVLLSSLQGAAVT
AIQIDGVLHEFSSIPGVREDVTDIILNIKTLGLRMHGEGPKRMHLRAVGPGEVTAGLIEV
GHDIEIMDPELVLCTLDEGAKLNIEFTVETGKGYVPASQNRPEDSPIGLIPIDAIFSPVR
KVAYKVENTRVGQVTDYDKLSMTVETNGAVTPDDAVALAARILQDQLQLFINFEEPTAVV
EEEKKDELPFNKNLLRKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKS
LNEIKEVLAQMGLHLGMEIANWPPENIEELAKKLEEPY
NT seq 1017 nt   +upstreamnt  +downstreamnt
gtgattcagaagaactggcaggaactgattaagcccaacaagctccatgtggagcccggg
gccgatgcccagcgtaccgcgaccgtggtcgccgaaccgctggagcgcggcttcggcatg
acgctgggcaattccctgcgccgcgtgctgctgtcgtcgctgcagggtgccgccgtcacg
gccatccagatcgacggcgttctgcacgaattctcgtccatccccggcgtgcgggaagat
gtcaccgacatcatcctgaacatcaagactctcggcctgcggatgcatggcgagggcccg
aagcgcatgcatctgcgtgcggtcggcccgggcgaagtcaccgccggcctgatcgaggtc
ggtcacgacatcgagatcatggaccccgaactggtgctgtgcaccctggacgagggcgcc
aagctgaacatcgagttcacggtcgagaccggcaagggctacgtccccgcctcgcagaac
cgtcccgaggattcgccgatcggcctcattccgatcgacgccatcttctcgccggtgcgc
aaggtggcctacaaggtggaaaacacccgcgtgggccaggtcaccgactacgacaagctg
tccatgaccgtcgagaccaacggcgcggtcactccggatgacgccgtggcgctcgccgcc
cgcatcctgcaggaccagctgcagctgttcatcaacttcgaggagcccaccgcggtcgtc
gaggaagagaagaaggacgaactgcccttcaacaagaacctgctgcgcaaggtggacgag
ctggagctttcggtccgttcggccaactgcctgaagaacgacaacatcatctacatcggc
gacctggtccagaagaccgaggccgagatgctgcgcactcccaatttcggccgcaagtcg
ctgaacgagatcaaggaagtgctggcgcagatgggtctgcacctgggcatggaaatcgcc
aattggccgccggagaacatcgaagagctggccaagaagctcgaagagccctattga

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