Magnetospirillum sp. XM-1: XM1_2298
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Entry
XM1_2298 CDS
T04231
Symbol
hupA
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
magx
Magnetospirillum sp. XM-1
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
magx03032
]
XM1_2298 (hupA)
03036 Chromosome and associated proteins [BR:
magx03036
]
XM1_2298 (hupA)
03400 DNA repair and recombination proteins [BR:
magx03400
]
XM1_2298 (hupA)
DNA replication proteins [BR:
magx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
XM1_2298 (hupA)
Chromosome and associated proteins [BR:
magx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
XM1_2298 (hupA)
DNA repair and recombination proteins [BR:
magx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
XM1_2298 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Ldh_2
Ribosomal_L12
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
CUW39367
UniProt:
A0A0U5I129
LinkDB
All DBs
Position
I:2301231..2301494
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AA seq
87 aa
AA seq
DB search
MSKTAISKAIRTATGCTAAQADEAVDALVSTILDGVKTEGRFRMIGFGTFSKSERPARQG
RNPQTGKTIEIAASSTIKFKASSSLKK
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaccgcgatttccaaagccattcgcactgccaccggctgcaccgctgcccag
gccgacgaagctgtcgatgccttggtgtccaccattctggatggcgtgaagactgaaggc
cggttccggatgattggatttgggaccttctcgaagtccgagcgcccggcccggcagggc
cgcaatccccagaccggcaagaccattgagatcgcggcgtcctcgaccatcaagttcaag
gcgtcgtcgtcactgaagaagtag
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