Magnetospirillum sp. XM-1: XM1_3073
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Entry
XM1_3073 CDS
T04231
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
XM1_3073 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
magx03021
]
XM1_3073 (rpoZ)
03400 DNA repair and recombination proteins [BR:
magx03400
]
XM1_3073 (rpoZ)
Enzymes [BR:
magx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
XM1_3073 (rpoZ)
Transcription machinery [BR:
magx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
XM1_3073 (rpoZ)
DNA repair and recombination proteins [BR:
magx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
XM1_3073 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CUW40134
UniProt:
A0A0U5I2X7
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All DBs
Position
I:3053503..3053883
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AA seq
126 aa
AA seq
DB search
MARVTVEDCVLKVPNRFELVLMAGQRARDISAGAKLTVERDNDKNPVVALREIADETVGL
DGLQNALILGLQKHVEVDEPEEDEMEGFIPDRDMAFETVANEDEMIEDGMSINDTGADFD
VDSGDE
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgttacggttgaagactgtgtactgaaggttccgaaccgcttcgagctggtg
ctgatggccggccagcgggcccgggacatttccgccggtgccaagctgacggtggagcgc
gacaacgacaagaacccggttgtggcgctgcgcgagatcgccgacgagactgtcgggctg
gacggcctgcagaacgccctgatcctgggcctccagaagcacgtcgaagtggacgagccg
gaagaggacgagatggagggcttcatccccgaccgcgacatggccttcgagaccgtcgcc
aacgaggacgagatgatcgaggacggcatgtccatcaacgacaccggcgccgatttcgac
gtggattccggcgacgagtaa
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