Magnetospirillum sp. XM-1: XM1_3125
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Entry
XM1_3125 CDS
T04231
Symbol
ribB
Name
(GenBank) Riboflavin biosynthesis protein RibBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase-2]
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx00740
Riboflavin metabolism
magx00790
Folate biosynthesis
magx01100
Metabolic pathways
magx01110
Biosynthesis of secondary metabolites
magx01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
XM1_3125 (ribB)
00790 Folate biosynthesis
XM1_3125 (ribB)
Enzymes [BR:
magx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
XM1_3125 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
XM1_3125 (ribB)
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
CUW40186
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Position
I:3104089..3105204
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AA seq
371 aa
AA seq
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MVSEYHAYLSSIEDIIEEARQGRMFILVDDEDRENEGDLVIPAEMANADAINFMARFGRG
LICLSLTRGRCEHLGLKPMSADNGTRMETAFTVSIEAREGVTTGISAADRARTVAVAIDT
EKNRYDIVTPGHVFPLMARDGGVLVRAGHTEAAVDISRLAGLNPSGVICEIMNDDGTMAR
MPDLVKFAQHHGLKIATIADLIAYRRRNDKIVAREVEAPFHSKWGGDWKMMVYTNTVAYA
EHIALVKGDLNAEGPVMVRVHAVNVLDDVLGDQGSGKAGELHSAMEMIAAHGSGVIVLIR
EPRPTSLSDMVRAHLERRPPAPALRDYGVGAQILLDLGVHEMILLSNTKRSIVGLEGYGM
KVVEQRSIPVG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
ttggtttccgaatatcacgcctacctttcgtccatcgaggacatcatcgaagaggcccgt
cagggccgcatgttcatcctggtggacgacgaggaccgcgagaacgagggcgatctggtc
atcccggccgagatggccaacgccgacgccatcaatttcatggcccgcttcgggcgcggc
ctgatctgcctgtcgctgacgcggggccgctgcgagcatctgggcctgaagcccatgagc
gccgacaacggcacccgcatggagaccgcgttcaccgtctccatcgaggcccgcgaaggc
gtcaccaccggcatttcggcggccgaccgggcgcgcaccgtggcggtggccatcgacacc
gagaagaaccgctacgacatcgtcacgccgggtcacgtctttccgctgatggcccgcgac
ggcggcgtgctggtgcgcgccggccataccgaggccgccgtggacatctcgcgtctggcc
ggtctcaatccctcgggcgtgatctgcgagatcatgaacgacgacggcaccatggcccgc
atgcccgatctggtgaagttcgcccagcatcacggcctgaagatcgccaccatcgccgac
ctgatcgcctatcgccgccgcaacgacaagatcgtggcgcgcgaggtcgaggcgccgttc
cattccaagtggggcggcgactggaagatgatggtctacaccaacacggtggcctatgcc
gagcacatcgccctggtgaagggcgacctcaacgccgaggggccggtgatggtccgcgtc
catgccgtcaacgtgctggacgacgtgctgggcgaccagggttcgggcaaggccggcgag
ctccattccgccatggaaatgatcgccgcccacggttccggcgtcatcgtgctgatccgc
gagccgcgccccaccagcctgtccgacatggtgcgcgcccatctcgagcgccgcccgccg
gctccggcgctgcgcgattacggcgtcggcgcccagatcctgctggatctcggcgtgcat
gaaatgattctgctgtccaataccaagcgctccatcgtcggcctggaaggctatggcatg
aaggtggtggagcagcggtcgattccggtcggctga
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