Magnetospirillum sp. XM-1: XM1_3252
Help
Entry
XM1_3252 CDS
T04231
Symbol
gyrA
Name
(GenBank) DNA gyrase (type II topoisomerase), subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
magx
Magnetospirillum sp. XM-1
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
magx03032
]
XM1_3252 (gyrA)
03400 DNA repair and recombination proteins [BR:
magx03400
]
XM1_3252 (gyrA)
Enzymes [BR:
magx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
XM1_3252 (gyrA)
DNA replication proteins [BR:
magx03032
]
Prokaryotic type
DNA Topoisomerases
XM1_3252 (gyrA)
DNA repair and recombination proteins [BR:
magx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XM1_3252 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CUW40313
UniProt:
A0A0U5I381
LinkDB
All DBs
Position
I:complement(3223254..3225941)
Genome browser
AA seq
895 aa
AA seq
DB search
MTTPPASPQFDITPVTIEDEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILFAMNEAG
YHYNKPFRKSARIVGDVMGKYHPHGDSAIYDAMVRMAQNFSMRLPLVDGQGNFGSMDGDP
PAAMRYTEARLARSAHSLLEDIDKETVDFQANYDESTHEPTVLPARYPNLLVNGAGGIAV
GMATNIPPHNLGEVIDACCAYIDDPEVTVERLMELVPGPDFPTGGTILGRSGIRAAQQTG
RGSVVMRGRVHVEEIRKDREAIVVTEIPYQVNKARMLEQIAELVRDKKLEGISDLRDESD
RDGVRVVIEIKRDAIAEVVLAQLYRFTPLQTSFGVNSLALNGGRPQMMTLRDIIKAFIAF
REEVITRRTIFELGKARDRAHVLAGLAIAVANIDEVIRLIRAAPDPSEAREKLMTRAWPV
GDVAPLIELIDEPGRTIEDGCYRLSETQAKAILDLRLHRLTGLERDKIGDELREIGHQIE
AYLLILSSRPRLFEVMKGELLEIREQFATPRRTTIEENEFEADIEDLIAREDMVVTVTNT
GYIKRVPVSAYRAQKRGGKGRSGMNIKDEDFLSEVFVANTHTPVLFFSSTGIAYKLKVYR
LPLGNPQARGKAMVNLLPLDEGETISTVMPLPEDETTWGDLHVMFVTSKGDVRRNPLSDF
TEVRANGKIAMKLGEGERLISVQTCSAETDDVLLATHLGKAIRFPVQDVREFKSRDSTGV
RGIRLDGEDEVISMSILRHTDYDSETRDAFLKGDLPAEQMEKMAAEQQFVLTVTENGFGK
RTSAFEYRITGRGGSGIANLDMTAKTGTVVASFPVNHEDDIMLVSDGGKLIRMPVDDIRI
AGRKTQGVTLLRTAENERVVSAARLCDIGGNGEEPDESDEGAGDAAEDMAGGEDA
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
ttgaccacgcctcccgcgtcgccgcaattcgatatcactccggtcaccatcgaagacgag
atgaagcgctcttatctcgattacgccatgagcgtgatcgtgagccgcgcgcttcccgac
gtccgcgacgggctgaagccggtccaccgccgcatcctgttcgccatgaacgaggcgggc
taccactacaacaagcccttccgcaaatcggcgcgcatcgtcggcgacgtcatgggtaag
tatcacccccatggcgattcggccatttacgacgccatggtgcgcatggcgcagaacttc
tccatgcgcctgccgctggtggacgggcagggcaatttcggctccatggacggcgacccg
ccggcagccatgcgctacaccgaggcccgcctggcccgctcggcccattccctgcttgag
gacatcgacaaggaaaccgtcgacttccaggccaattacgacgaatccacccacgaaccc
acggtcctgccggcccgctatcccaatctgctggtcaacggcgccggcggcatcgcggtg
ggtatggccaccaacattccgccccacaacctgggcgaggtgatcgacgcctgctgcgcc
tatatcgacgaccccgaggtgacggtcgagcggctgatggagctggtgcccggccccgat
ttccccacgggcggcaccattctcggccgttccggcatccgcgccgcccagcagacgggc
aggggatctgtggtgatgcgcggccgcgtccacgtggaggagatccgcaaggaccgcgag
gccatcgtcgtcaccgagattccctatcaggtgaacaaggcccgcatgctcgagcagatc
gccgagctggtgcgcgacaagaagctcgagggcatctcggacctcagagacgaatccgac
cgcgacggcgtgcgggtggtgatcgagatcaagcgcgacgccatcgccgaggtggtgctg
gcccagctctaccgcttcacgcccttgcagaccagcttcggcgtcaactcgctggccttg
aacggcggccggccgcagatgatgacgctgagggacatcatcaaggccttcatcgccttc
cgcgaggaggtgatcacccggcgcaccatcttcgagctgggcaaggcccgtgaccgcgcc
cacgtcttggccggcctggccatcgccgtggccaatatcgacgaggtcatccgcctgatc
cgcgccgcccccgatccttccgaggcgcgcgagaagctgatgacccgggcctggccggtg
ggcgacgtggcgccgctgatcgagctgatcgacgagcccggccgcaccatcgaggacggc
tgctaccgcctgtccgagacccaggccaaggccatcctggacctgcgcctgcaccgcctg
acgggccttgagcgcgacaagatcggcgacgagctgcgcgagatcggccaccagatcgag
gcctacctgctgatcctgtcgtccaggccccgcctgttcgaggtgatgaagggcgaattg
ctggaaatccgcgagcagttcgccacgccgcgccgcaccaccatcgaggaaaacgagttc
gaggccgatatcgaggacctcatcgcccgcgaggacatggtggtgacggtgaccaacacc
ggctacatcaagcgggtgccggtctcggcctatcgcgcccagaagcgcggcggcaagggc
cgttcgggcatgaacatcaaggacgaggatttcctctccgaggtgttcgtggccaacacc
cacaccccggtgctgttcttctcgtccaccggcatcgcctacaagctgaaggtctaccgc
ctgccgctgggcaatccccaggcgcgcggcaaggccatggtcaacctgctgccgctggac
gagggcgagaccatctccaccgtcatgccgctgcccgaggacgagaccacctggggcgac
ctgcacgtcatgttcgtcacctccaagggcgacgtgcggcgcaatccgctgtccgacttc
accgaggtgcgcgccaacggcaagatcgccatgaagctgggcgagggcgagcggctgatc
tcggtgcagacctgttccgccgagaccgacgacgtgctgctggccacccatctgggcaag
gccatccgcttcccggtccaggacgtgcgcgagttcaagagccgcgattcgaccggcgtg
cgcggcatccggctggacggagaggacgaggtcatctccatgtccatcctgcgccacacc
gactatgattccgagacccgcgacgccttcctcaagggcgacctgccggccgagcagatg
gagaagatggccgccgagcagcaattcgtgctcaccgtcaccgaaaacggcttcggcaag
cgcacctcggccttcgaataccgcatcaccggccgtggcggctccggcatcgccaacctg
gacatgaccgccaagaccggcaccgtggtggcgtcgttccccgtcaaccacgaggatgac
atcatgctggtgagcgacggcggcaagctgatccgcatgccggtggacgacatccgcatc
gccgggcgcaagacccagggcgtcaccctgctacgaacggcagagaacgaacgggtggta
tccgccgccagactgtgcgatatcggaggcaatggcgaggagccggacgaatccgacgag
ggagccggggatgcagccgaggatatggcgggaggcgaggatgcctaa
DBGET
integrated database retrieval system
