Magnetospirillum sp. XM-1: XM1_3516
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Entry
XM1_3516 CDS
T04231
Name
(GenBank) conserved protein of unknown function(containing Cytidine deaminase-like domain,5-139;containing CMP/dCMP deaminase, zinc-binding,3-113)
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx00240
Pyrimidine metabolism
magx01100
Metabolic pathways
magx01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
XM1_3516
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
magx02044
]
XM1_3516
Enzymes [BR:
magx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
XM1_3516
Secretion system [BR:
magx02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
XM1_3516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
APOBEC_N
SNAD4
APOBEC2
NAD1
Motif
Other DBs
NCBI-ProteinID:
CUW40577
UniProt:
A0A0U5N6V2
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All DBs
Position
I:complement(3512652..3513074)
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AA seq
140 aa
AA seq
DB search
MTMAWYDYFMGFAKHAASKSKDPSTQVGAVAVGPDGEIRATGYNGLPRGVEDKPERMERP
AKYLWTSHAEENLVAHAARVGVSLKGCTVYVTHYPCSRCARSLIQAGVAQIHVGDGTTSM
PAEEFDTARVMFEESGVKVG
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggcctggtacgactacttcatgggctttgccaagcacgccgccagcaagtcc
aaggaccccagcacccaggtgggcgccgtggcggtggggcccgacggcgagatccgcgcc
accggctataacggcctgcccaggggcgtcgaggacaagcccgagcgcatggagcgcccg
gccaagtatctgtggacctcgcacgccgaggaaaacctggtggcccatgccgcccgggtg
ggggtcagcctcaagggctgcaccgtctacgtcacccactatccctgctcgcgctgcgcc
cgttcgctgatccaggccggggtggcgcaaatccacgtgggcgacggcaccacctccatg
cccgccgaggaattcgacaccgcccgggtgatgttcgaggaatccggcgtcaaggtgggc
tga
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