Magnetospirillum sp. XM-1: XM1_4101
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Entry
XM1_4101 CDS
T04231
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
magx
Magnetospirillum sp. XM-1
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
magx03021
]
XM1_4101 (rpoH)
Transcription machinery [BR:
magx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XM1_4101 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
HTH_25
HTH_11
Motif
Other DBs
NCBI-ProteinID:
CUW41160
UniProt:
A0A0U5MPB7
LinkDB
All DBs
Position
I:4082179..4083069
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AA seq
296 aa
AA seq
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MTAIASSLSLAPEGNLTRYLQDIRKFPMLPPEEEYLLAKRFREHGDLTSANRLVTSHLRL
VAKIAMGYRGYGLPLGELISEGNVGMMQAVRRFDPERGFRLATYAMWWIRAAIQEYILHS
WSLVKMGTTAAQKKLFFNLRKLKGQMQAIEEGDMSAENVALIATKLDVTEDEVVTMNRRL
SSPDHSLNAPVRAEGEGEWQDWLVDDHEDQETELGEREELGQRRQMLTSALAALNDRERA
ILVQRRLTEEPATLEDLSQRYGISRERVRQIEVRAFEKLQKSVKSASAQAESQNRA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaattgcttccagtctgtcgctcgcgcccgaaggcaacctgacccggtacctt
caggacatccgcaaattccccatgttgccgcccgaggaggaatacctcctggccaagcgc
ttccgcgaacacggcgacctgacctcggccaaccggctggtgaccagccatctgcgccta
gtggccaagatcgccatgggctatcgcggctatggcctgccgctcggcgagctgatcagc
gaaggcaatgtcggcatgatgcaggcggtgcgccgcttcgaccccgaacggggcttccgg
ctggccacctacgccatgtggtggatccgcgccgccatccaggaatacatcctgcattcc
tggtcgctggtgaagatgggcaccaccgccgcccagaagaagctgttcttcaacctgcgc
aagctcaagggccagatgcaggccatcgaggaaggcgacatgtccgccgagaacgtggcc
ctgatcgccaccaagctggacgtcaccgaggacgaggtcgtcaccatgaaccggcggctg
tccagccccgaccattcgctgaacgcgccggtgcgcgccgagggcgagggcgagtggcag
gactggctggtggacgaccacgaggaccaggagaccgaactgggcgagcgcgaggaactg
ggccagcgccggcagatgctgaccagcgccctggccgccctcaacgaccgcgagcgggcc
atcttagtccagcgccgcctcaccgaggagccggccaccctggaagacctgtcccagcgc
tacggcatctcgcgcgagcgggtgcgccagatcgaggtgcgcgccttcgagaagctgcag
aagtcggtgaagtcggcttccgcccaggccgaatcccagaaccgggcgtaa
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