Magnetospirillum sp. XM-1: XM1_4578
Help
Entry
XM1_4578 CDS
T04231
Name
(GenBank) putative cadherin-like domain
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM1_4578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
DUF4347
Big_9
Cadherin_4
Cadherin_3
Cadherin
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
CUW41634
UniProt:
A0A0U5G061
LinkDB
All DBs
Position
I:complement(4606865..4613071)
Genome browser
AA seq
2068 aa
AA seq
DB search
MGHIKRKRHRNTLGLLALEPRWMFDGAAAVDAAHAAPDAAAKALIPDAPAPVEVRAADPT
RNNGRKEVVFIDTSVADYKTLEAAIKPGVEIEEIDANQSGLAQIAKWAETHAGYDSMSIL
SHGGEATLRIGADGLAAASLSDPAVQAELAQIGHALNVGGDLLVYGCDVAKGADGQRFID
GLAAATGADVAASENVTGANGDWALEHASGVIDGDSPLDPSRLADYDGDLQQLSAWNRTY
SGNPVALSYDANGTISAGLNGSWTVRYGAGPNFNYDMIFTANYTYTAGPLSGQTVSLEGR
QGFIGVNATNYGSYYETGQTSGGGVTFYNTANGQTFVPTYAGTLSTWYVMVSDAFSNTQS
FNPSQSLAINPNAVPAFVGGSSQSLTVAVGASAVDIKSYLHINDTDSGQTETLTQSSGPS
HGTLSIAGATGTSGSANITPGGTITYTPTAGYTGTDTFSIQVSDGTATATKTFTVTVNDA
PTISGATAGQTVNDNATVSPFTNVTIADTGTSDGSTAQTQTVSISLGSSLQGSFTTLNGF
TNLGAGNYSYSGTAAAATTAIRGLVFTPTANRVAPGLTETTSMTVSVSDGVASAVTDYTT
TVISTSINDAPTNIALSSSSVAENSAAGTVIGTLSTTDADSGDSAAYSLVGGATDKFQIS
GGQLQVKAGANLDYETATSHSVTVRTTDAQGAFYDKVFTITVTNVNEAPTDIALSAATVP
ENSAAGTAVGNLSSTDPDSGNTFTYSLVSGATSKFQIVGGQLQVKAGANLDYETATSQSV
TVRATDQGGLTYDKAFTIAITNVNDAASVTINEGAVVVQGQSVTITNARLASYDGEQAAS
TLSYTVVTKPTGGILYKGGVALNNGDTFLQSDLGAGNITYTHGGGGGGSDSFVFKVTDTA
ANDTANTTFAITVNRNPTVANAIANQSWSGAGAKSFQFVSNVFSDADADTMTYSAKQQDG
SALPSWLSFSSATRTFSGNPPSGVASVAIRVTADDGRGGSAANDFTINISSANDTATVAN
AIANQTWTGSGAKSYQVPANTFSADPDGDVLSYSATLQGGGALPSWLSFDTASRTFSGNP
PAGVGSVNLTVTANDGNGGTVSSTFTLTLSSVNDAPVLANPLGPQTISGPGVWSYTVPAS
TFTDADNDTLTWSATKTDGSALPAWLSFNPATRVLSGNAPNGVPQVDVKISVSDGNGGSA
SSSFRLNIDQNTSNDAPVLANAIASTTWTGSGAKTYQIPANTFTDADGDTLALSATLTGG
GALPSWLRFNPQAWTFSGNPPATADGQTYAITVTANDNEGGSISGAFNLTIASANDSPVL
ATGIADQSMSGSGAWSYQAPVSTFTDADGDTITWSATQSDGSALPSWLSFDANTRTFSGN
PPSSVSTLLLKVTGTDPSAAAVSSTFTLRVSNANDAPVVANGLAGQSMSGPGAWTYQVPA
NTFTDADNDTLSYSATQSDGSALPSWLSFDANTRTFSGNPPWGAPSVALKVTADDGNGGS
AASSFQLSIDQNTTNDAPVVANAIGAQTKDGSGAWTYQVPANTFFDADGTPVTLSASLSS
GAALPSWLSFNASTRTFSGNPPASVNGQTFAIRVTATDPQNSTVTNTFNLTVTNANDTPT
VANAIADQSWSGSGSKTFQFNANVFNDADGDTMTYTATQADGTALPSWLSFTGASRTFSG
NPPSSLSYIDLKVTASDGNGGAKSTTFREYISNANDQPTVSSPTISGALGKGGSAPIPGG
TFSDPDGDPLTYTAKGPNNTPLPSWLKFDPITQTFTGTPSQGQSGSIPVTVTVTDSSGAT
ISTTMTLSYDNPSPPPPPPPPPPPPPVVEAPKPPPPPPSEGPALITSIRAAVSDSGAFTQ
GGSGIGSNAFAARIASVTSGGGFQVAVSAPPVNAVSDGALFVAKGIPAVVVDSKVINFAV
PVDAFGHTSAEAGIQLAAKMSDGRPLPPWMSFDATRGIFVGEAPEGFKGSLAVVVVARDN
GGHEVATNFRIQIGGGAVKEGGPAPAKQNGEDQPAPAPQGQRSGDLAPARDGKPIRTGDL
HHTGKLAFTQQLKQAGRHAAMARLARWA
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgggccatatcaagcgcaagcgtcaccgcaacacactcggcctgctcgccctggagccg
cgctggatgttcgacggcgcggcggccgtggatgccgcccatgccgcgcccgacgcagcc
gccaaggcgctgatccccgatgctcccgctccggtggaggtgagggccgccgatccgacc
cggaacaatggacgcaaagaggtggtgttcatcgacacctcggtggccgactacaagacc
cttgaggccgccatcaagcccggcgttgagatcgaggagatcgacgccaaccaaagcggt
ctggcccagatcgccaaatgggcggagacccatgccggctacgacagcatgtccatcctg
tcccatggcggcgaggccaccttaaggatcggcgcggacggattggccgccgccagtctt
tcggatcccgccgtccaggccgagttggcccagatcggccatgccctgaacgtcggcggc
gacctgctggtctatggctgcgatgtggccaagggggcggacggacagcgattcatcgat
ggtctggcggctgcgaccggcgccgatgtggcggcgtccgaaaacgtcaccggcgcgaac
ggggattgggctcttgaacatgcgtcgggcgttatcgatggggattcgccattggatccg
tccaggctcgccgactatgacggcgatctccagcaattgtcggcctggaaccgcacctat
tcgggaaacccggtggcgctgtcctacgatgctaacggcaccatcagcgcgggtttgaac
gggtcgtggaccgttcgctacggtgctggaccaaactttaactacgacatgattttcacg
gcgaactacacgtacacggcgggaccacttagcggccagacggtcagccttgaaggccgg
cagggattcatcggcgtcaatgccacaaattacggctcctattatgaaacaggtcaaaca
tccggcggtggcgtcaccttttacaacacggcgaacggccagacattcgtgcccacctat
gcggggacattgtcgacgtggtacgtcatggtcagtgacgcgttttccaatacccagtca
ttcaatccatcccaatcgcttgccatcaatcccaacgccgtgcccgccttcgtgggcggc
agttcccagtccctgaccgtggcggtgggcgcctcggcggtggatatcaagtcctatctc
catatcaacgacacggattccggccagacggaaaccttgacccagagcagcggccccagc
cacggcaccttgagcattgccggggccaccgggacatcgggcagcgccaacatcacgccg
ggcggcaccatcacctacacgcccacagccgggtataccggcacggacacattcagcatc
caggtcagcgacggcacggcgacggcgaccaagacctttacggtcaccgtcaacgacgcg
ccgaccatcagcggagcgaccgccgggcagacggtcaacgacaacgccacggtatcgccg
ttcaccaatgtgaccatcgccgacaccggcacttcggacggctccacggcgcagacccag
acggtcagcatctcgctgggcagttccctccagggcagtttcaccacgctgaacggcttc
accaatctgggcgcagggaactactcctattccggcacggccgccgcggcgaccaccgcc
atccgggggctggtgttcacgccgaccgccaaccgggtggcgccgggcttgaccgagacc
acctcgatgaccgtctccgtcagcgatggcgtggcttcggcagtcacggactacaccacc
acggtgatctccacctccatcaacgacgcgccgaccaacattgccctgtcgtcgtccagc
gtggcggagaacagcgccgcaggaacggtgatcggcactctatcgaccaccgatgccgac
agcggggacagcgccgcctattccctggtgggcggcgcgacggacaagttccagatttcc
ggcggccagttgcaggtcaaggcgggggccaacctggattacgagaccgccaccagccat
tcggtgacggtgcgcaccaccgatgcccagggcgccttctacgacaaggtcttcaccatc
acggtgaccaacgtcaacgaggcaccgaccgatatcgccctgtcggctgccacggtcccg
gagaacagcgcggcgggaacggcggtgggcaacctgtccagcaccgaccccgattccggc
aacacctttacctattcgctggtcagcggcgctacgtcgaagttccagatcgtcggcggc
cagttgcaggtcaaggccggggccaacctggattacgagaccgccaccagccagagcgtg
acggtccgcgccaccgaccagggtggtctgacctacgacaaggccttcaccatcgccatc
accaacgtcaacgatgcggccagcgtcaccatcaacgagggcgcggtggtggtgcaaggc
cagtcggtgaccatcaccaacgccagactggcctcctacgacggcgagcaggcggccagc
accctgagctataccgtggtgaccaagcccaccggcggcatcctctacaagggcggcgtg
gcgctcaacaacggcgacaccttcctgcagtcggatttgggtgcgggcaacatcacctac
acccatggcggcggcggcggcggcagcgacagcttcgtctttaaggtgaccgacaccgcc
gccaacgacaccgccaacaccaccttcgccatcaccgtcaatcgcaaccccaccgtggcc
aacgccatcgccaaccagtcctggtcgggggcgggggcgaagtcgttccagttcgtgtcc
aatgtgttcagcgacgccgatgccgataccatgacctattcggccaagcagcaggacggt
tcggccctgccgtcctggctgtcgttcagctccgccacccggaccttttccggcaatccg
ccttcgggtgtggccagtgtcgccatccgggtgaccgccgatgacgggcgcggcggcagc
gccgccaacgacttcaccatcaacatttccagcgccaacgacaccgcgacggtggccaac
gccattgccaaccagacctggaccggatcgggggccaagagctatcaggttcccgccaac
accttctcggcggacccggatggcgacgtcctgagctattcggccacattgcaaggcggc
ggcgcgcttccgtcctggctgagcttcgataccgccagccgtaccttcagcggcaatccg
cccgccggggtgggatcggtcaacctgacggtcaccgccaatgatggcaatggcggcacg
gtgtcgtccaccttcaccctgacgcttagctccgtcaacgatgctccggttctggccaat
cccctggggccgcagaccatcagcggaccgggggtatggagctatacggttccggccagc
accttcaccgacgccgacaacgataccctgacctggagcgcgaccaagaccgacggctcc
gcgcttccagcctggctgagcttcaatccggccacccgtgtcctgtcgggcaacgcgccg
aatggggtgccgcaggtggacgtgaagatcagcgtatccgacggcaatggcggttctgcc
tcgtcctccttccgtctcaacatcgaccagaacaccagcaacgacgccccggtcctcgcc
aatgccatcgccagcaccacctggaccggatcgggggccaagacctatcagatcccggcc
aacaccttcaccgatgccgacggcgacaccctggccctgtccgccaccttgaccggcggt
ggggcgctgccctcctggctgcgcttcaatccccaggcctggaccttttccggcaatccc
cccgcgaccgccgacggccagacctatgccatcacggtgaccgccaacgacaacgagggc
ggcagcatttccggtgccttcaatctgaccatcgccagcgccaacgattcgccggtgctg
gccaccggcatcgccgaccaaagcatgagcggttccggcgcctggagctatcaggcgccg
gtcagcactttcaccgacgcggacggcgataccatcacttggagcgccacccagtccgat
ggttcggccctgccgtcctggctgtccttcgacgccaatacccgcaccttctccggcaat
ccgccgtccagcgtctcgactttgctgctgaaggtgaccggcaccgatccgtcggcggcg
gctgtatccagcaccttcacactccgggtctcgaatgccaatgatgcgcctgtggtggcc
aatgggttggcggggcagagcatgtcggggccgggggcgtggacctatcaggttcccgcc
aacaccttcaccgacgcagacaacgacaccctgagctatagcgccacccagtcggatgga
tcggccctgccatcctggctgtccttcgacgccaatacccgcaccttctccggcaatccc
ccctggggcgcgcccagcgtggcgctgaaggttactgccgatgatggaaacggcggcagc
gccgcctcgtcattccagctctccatcgaccagaacaccaccaacgacgccccggtggtc
gccaacgccattggcgcccagaccaaggatggctctggcgcctggacctatcaggttccg
gccaacaccttcttcgacgccgatggtacgccggtgaccttgagcgcatctttgagcagt
ggcgccgcccttccatcctggctcagcttcaacgcttccacccggaccttctccggcaat
ccgccggcctcggtcaatggccagactttcgccatcagggtgactgccactgatccgcag
aactcgacggtgaccaacaccttcaacctgaccgtaaccaacgccaatgacacaccgacg
gtggccaacgccatcgccgatcagagttggagcggatcgggaagcaagacgttccagttc
aatgccaacgtcttcaatgacgctgatggcgataccatgacctataccgccactcaggca
gacggcaccgccctgccgtcctggctgagtttcaccggggcgagccgaaccttttccggc
aatcctccctccagcttgtcctacatcgacttgaaggtgacggcctcggacggtaatggc
ggcgccaaatccaccaccttccgggaatacatctccaacgccaacgaccagcccaccgtc
agttccccgaccatctccggggccttgggcaagggcggctcggcaccgattcccggcggc
accttcagtgatcccgatggcgaccctctgacctataccgccaaagggccgaacaacacg
ccattgccgtcctggctgaagtttgatccgatcacccagaccttcaccggcaccccgtcc
caggggcagagcggttccatcccggtgacggtgaccgtgaccgattcctcgggtgccacc
atctcgaccaccatgacgctgtcctatgacaatccgtctccgccaccgccgccaccgccg
ccaccgccgccaccgccggtcgtcgaggctcctaagccgccaccgcctcccccatcagag
ggaccggcgctgattacctcgatccgggcggcagtgtcggatagtggcgctttcacccag
ggaggctccggtattggcagcaatgcctttgccgccaggatcgcttccgtgaccagcggc
ggcggattccaggtggctgtttcagcgccgccggtcaatgctgtcagcgatggcgcgttg
tttgtcgccaagggcatccccgccgtggtcgtggactccaaggtcatcaatttcgcggtg
cccgtggacgcattcggtcacacgagcgccgaggccggcatccagcttgcagccaagatg
agcgatggtcgccccttgccaccctggatgagttttgatgcaacgcgcggtatttttgtc
ggtgaggcgccggagggcttcaaggggtccctggcggtggtcgtggtcgcccgtgataac
ggaggacacgaggtcgccaccaatttccgtatccagatcggtggtggtgcggtgaaggag
ggcgggccggcaccagccaagcagaacggcgaagaccaacccgcaccagctccgcaagga
caacggagtggtgacctcgccccggcgcgtgacggcaagccgatccgtactggcgatctt
catcatacgggcaagctggccttcacccagcaactcaagcaggctggccgccacgcggcc
atggcccgtctggcgcggtgggcatga
DBGET
integrated database retrieval system