Magnetospirillum sp. XM-1: XM1_4743
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Entry
XM1_4743 CDS
T04231
Name
(GenBank) Putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx03030
DNA replication
magx03430
Mismatch repair
magx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XM1_4743
03430 Mismatch repair
XM1_4743
03440 Homologous recombination
XM1_4743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
magx03032
]
XM1_4743
03400 DNA repair and recombination proteins [BR:
magx03400
]
XM1_4743
Enzymes [BR:
magx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XM1_4743
DNA replication proteins [BR:
magx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XM1_4743
DNA repair and recombination proteins [BR:
magx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XM1_4743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CUW41787
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All DBs
Position
I:complement(4777278..4777925)
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AA seq
215 aa
AA seq
DB search
MLTLDDLSDVGRLVAIDAETTGFRVPTAAEIKKMPKGLRLPGVMIEIGCVELLRGEDGWK
TGESWHRRIQPGGPIAKASIAVHGINPADLKDAPQFRDVLDEFETFIGQDVLLAHSAENE
IEFLNFEYARVGRCGFDEVIFSDNDFVCTQELSRQFFPGVPGSLDVLCDRLWIDRSDRFE
HHGALLDAILTAEAFMKMAGGFVQDDTRYMSFGDQ
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgctcacccttgatgatctatccgatgttgggcgtctcgttgccattgatgcggaaacc
acgggttttcgggtgccgaccgctgccgagatcaaaaagatgcccaaggggctacggttg
cccggcgtcatgatcgagatcggctgcgtcgaattgctgcgtggtgaggacgggtggaaa
accggtgaaagctggcaccgccgcattcagccgggcggccctatcgccaaagcctcgatt
gcggttcatgggatcaaccccgccgacctgaaagacgccccccagtttcgcgatgtgctg
gacgagttcgagacgttcattggtcaggacgttctgcttgcccacagtgccgaaaatgag
atcgagtttctgaatttcgagtacgccagggtaggccggtgcggcttcgatgaagtcatt
ttctcggacaatgatttcgtctgcacccaagagctatcgcggcaatttttccctggcgtg
ccgggatcgttggacgttctgtgcgaccggctgtggatcgaccgatccgatagattcgag
catcatggtgccttgcttgatgccattctgacggcagaagccttcatgaagatggctggt
ggcttcgtccaggacgacacccgctacatgagctttggggatcagtag
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