Methylotuvimicrobium alcaliphilum: MEALZ_0370
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Entry
MEALZ_0370 CDS
T01649
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mah
Methylotuvimicrobium alcaliphilum
Pathway
mah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MEALZ_0370 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mah03019
]
MEALZ_0370 (rhlE)
Enzymes [BR:
mah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MEALZ_0370 (rhlE)
Messenger RNA biogenesis [BR:
mah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MEALZ_0370 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
DUF8086
HI1480
Motif
Other DBs
NCBI-ProteinID:
CCE22070
UniProt:
G4SXL5
LinkDB
All DBs
Position
complement(396709..398073)
Genome browser
AA seq
454 aa
AA seq
DB search
MLFSELGLAAELVRAVSEQGYSTPTPVQRQAIPAILNGRDVLAGAQTGTGKTAGFTLPLL
HLLHTQKPKSNRRAVRALILTPTRELAAQVGESVDTYGKYLPLKSAVVFGGLSINPQIAQ
LRRGVDILIATPGRLLDHIAQKTVDLSQLEILVLDEADRMLDMGFIRDIRKILALLPPNG
HDGRQNLLFSATFSDEIRQLANGLLHKPEQIEVARRNTTVEIVAQTVHPVDRNRKQELLS
HLIGSQDWRQVLVFTRTKHGANKLAEKLERDGIGSAAIHGNKSQAARTKALADFKSGAVR
ALVATDIAARGLDIDQLPHVVNYELPNIPEDYVHRIGRTGRAGNAGEAISLVCVDEHDFL
RDIERLIKRDINKIEIEGFQPDPTIKPEPVFKQRQQRSPRAGNDARNNGQRNNGKPNERQ
AAKPARSKPRRGNGANSGSGRPQQGRSGQRRLSA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttattttccgaactcggcctagcagccgaattagtccgtgctgtctcagaacaaggc
tacagcacgccaacacctgttcaacgtcaagcgatacccgcaattctcaacggtcgtgac
gttctggccggtgcacaaaccggtaccggcaaaaccgcggggttcacattacctttgctg
cacctgctgcacacccaaaaacccaaaagtaatcgacgtgcggtaagagcactgatccta
acgcctacgcgcgaactcgccgctcaagtcggcgaaagcgtcgatacttacggaaaatat
ttaccgttaaaatcagcggtagtcttcggcggtctcagtatcaacccgcaaatcgcgcaa
ttgcgtcgtggcgtggatattctaatcgcaacgccgggccgtctgctcgatcatatcgca
cagaaaaccgttgatttatcgcaattggaaatactggtgctcgacgaagccgaccgcatg
ctcgacatgggctttattcgcgacatccgtaaaattcttgcgttgctaccgccaaacggt
cacgatggccgacaaaatctactcttttcagcaacgttctccgatgaaatccgtcaacta
gctaacggcttgttgcataagccggagcaaatcgaagtcgcgcgtcgtaatacgaccgtc
gaaatcgtagctcagacggttcatccggtcgaccgcaaccgtaaacaagaacttttgtcg
catttaatcggcagccaagactggcgtcaggtgttggttttcacacgaaccaaacacggt
gccaacaaactcgctgaaaaactagaacgcgacgggatcggctcggccgcgattcacggc
aataagagtcaagccgcacgcacaaaagcattggccgatttcaaaagcggcgcggttcgc
gccttggttgcaacagacatcgcagcgcgcggattggatatcgaccaattaccgcatgtc
gtcaattacgaacttcccaatataccggaagattatgttcatcgcatcggccgcaccggt
cgagcgggcaatgccggagaagccatatcgctagtctgcgtcgacgaacacgatttcctg
cgagacatcgaacgattgatcaaacgcgacattaacaaaatcgaaatcgaaggcttccaa
cctgacccgaccatcaaacccgaaccggtcttcaaacaacgccagcaacgctcgcctcgc
gccgggaatgatgcccgaaataacggtcaacgcaacaacggcaagccgaatgagcgccaa
gcagcgaagcccgctcgtagcaaaccgcggcgcggtaacggagcaaattccggctctggc
cgcccgcaacaaggacgctcaggacaaaggcgccttagcgcttag
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