KEGG   Methylotuvimicrobium alcaliphilum: MEALZ_0572
Entry
MEALZ_0572        CDS       T01649                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
mah  Methylotuvimicrobium alcaliphilum
Pathway
mah03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mah00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    MEALZ_0572 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mah03019]
    MEALZ_0572 (rnc)
   03009 Ribosome biogenesis [BR:mah03009]
    MEALZ_0572 (rnc)
   03036 Chromosome and associated proteins [BR:mah03036]
    MEALZ_0572 (rnc)
Enzymes [BR:mah01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     MEALZ_0572 (rnc)
Messenger RNA biogenesis [BR:mah03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MEALZ_0572 (rnc)
Ribosome biogenesis [BR:mah03009]
 Eukaryotic type
  90S particles
   RNase
    MEALZ_0572 (rnc)
 Prokaryotic type
  rRNA processing factors
   MEALZ_0572 (rnc)
Chromosome and associated proteins [BR:mah03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     MEALZ_0572 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: CCE22267
UniProt: G4SZX9
LinkDB
Position
complement(639264..639947)
AA seq 227 aa
MTRDPEILCKKLGLHFNNMQLFKMALTHRSMGAHNNERLEFLGDSILGFVVAEKLHKMFP
EASEGVLSRLRASLVNQGALADLARKLNIGDYLILGSGELKSGGFRRDSILSDAVEAIIG
ALFKDQGIEICRQWVLDMLQDKLDSLSLDNWQKDPKTQLQELMQSKKLDLPDYTLITMSG
LPHEQTFKVKCTIPLSDKSCIGSGVSRKKAEQDAAEQMLALLKREQS
NT seq 684 nt   +upstreamnt  +downstreamnt
gtgacgagagaccctgagatactttgtaaaaaactgggcttgcacttcaataacatgcaa
ttgtttaaaatggcgctgacccatcgcagcatgggcgcgcacaataacgagcgtctggaa
tttctaggcgactcgatactcggcttcgtggtcgccgaaaaactgcataaaatgtttccg
gaagccagtgaaggcgttttaagtagactcagagccagccttgtcaatcagggcgcgctc
gcggacttggcaagaaagcttaatataggcgattatttaatccttggctcgggagaactg
aaaagcggtggctttcgacgcgactcgatcctatccgacgctgtcgaggcgattatcggc
gccttgtttaaggaccaaggcattgaaatttgtcggcaatgggttctggatatgcttcag
gacaaactcgacagcttatcgctcgataattggcaaaaagacccaaaaacacaattgcag
gaattgatgcaatcaaaaaaactggacctccccgactacaccttaataacaatgtccggc
ctaccgcatgaacaaacgtttaaagtgaaatgcacgattccattatcggacaaatcgtgt
atcggttccggcgtatcaagaaaaaaagccgaacaagacgctgcagagcaaatgctggca
ctattaaagcgagaacaatcatga

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