Methylotuvimicrobium alcaliphilum: MEALZ_0669
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Entry
MEALZ_0669 CDS
T01649
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mah
Methylotuvimicrobium alcaliphilum
Pathway
mah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MEALZ_0669 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mah03019
]
MEALZ_0669 (pcnB)
Enzymes [BR:
mah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MEALZ_0669 (pcnB)
Messenger RNA biogenesis [BR:
mah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MEALZ_0669 (pcnB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
CCE22364
UniProt:
G4T0T4
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All DBs
Position
complement(732401..733897)
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AA seq
498 aa
AA seq
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MVNSHHNTTHKTKHRQDDGFRKKLTRYKLPRTKAILNFFKKIISSSTGAPLIPAKDDGVS
QPEAPRIYSRSEHNISRSQISENALKVLYRLKKSGFEAYLVGGCVRDLLLGREPKDFDVV
TDAHPDQVRKIFRNCRLVGRRFRLAHVHFGREIIEVATFRGNAGEVPDDDLLLNDEGRLV
RDNIYGTIEEDVWRRDFTVNSLYYNIRDFSVTDYVGGMADHKTGTLRLIGDPETRYREDP
VRMLRAIRFAVKLGFTLHPDCEKPITDLAELLHHIPPARLFDEAIKLFLSGHALQTFEML
RHYGLFQILFPAVERSLSVEEQGFPRLFLVRALENSDSRVAEGKTVTAYFLFAAFLWDAV
KTYAEEQIEKGVPENIAFQVAANELIAEQVKRVSLPRQISLAMREVWSLQPRFARRRGSK
PYRLLNHPRFRAAYDFLLLRIETEGVDPELGEWWTQFQAAGEAEQKKMTQPTQKSNRKPL
KRRRPRPNKPSNADTAKD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacagtcatcataatacaacacataagaccaaacatcgacaggatgacggtttc
cgtaaaaagttaactcgttataagttaccaaggacaaaggccattttaaacttttttaaa
aaaatcatttcctcgagcaccggagccccattaataccggcgaaagatgacggtgtttca
cagccggaagcacctaggatttattctcgctccgagcacaatatctcaagatctcaaatc
agcgagaatgccttgaaagtgctataccgactcaaaaagtccggctttgaagcctatttg
gttggcggttgcgttcgagacctattattaggccgagagcctaaggacttcgatgtcgtg
accgatgcccatcccgaccaggtacgcaaaattttccgcaactgccgattggttggccgg
cgctttcgcttagcgcatgtgcatttcgggcgggaaatcatcgaagtcgccacatttcga
ggcaatgccggagaagtcccggacgacgacctactgctcaacgatgaaggcagattggtg
cgcgataatatctacggtacgattgaggaggatgtctggcgacgtgacttcaccgtcaat
tcgctctattacaatattcgggatttttcggttactgattacgtaggcggcatggccgac
cataagaccggaacattgcgcctaatcggcgaccccgaaacccgctatcgggaagatccg
gttcgcatgttgagagcgatccggtttgccgttaaactcggctttaccctgcatccggac
tgcgagaaaccgataaccgaccttgccgagctactgcatcacattcctcctgctcgttta
ttcgacgaggcaataaagctatttctatcaggccatgccttacaaacttttgaaatgctt
cgccattacggtttatttcaaattttattcccggcggtcgagcgcagtttgtccgtcgaa
gaacaaggctttccaaggctctttctggtcagggctttggaaaactcagactcccgagtc
gccgaaggcaagaccgttaccgcctactttttatttgcggcgtttttatgggacgcggta
aaaacctatgccgaagagcaaatagaaaaaggcgttccggaaaatattgcctttcaagtt
gccgccaacgaactgattgccgagcaagttaagcgcgtttcgctacctcgtcaaattagt
ttagccatgcgcgaagtatggagcctgcaacccagatttgcacgaagacgaggctcaaaa
ccctatcgcttgttaaaccatccaagattcagagcggcttacgattttttattgttgcgc
attgaaacggaaggcgtggatcctgaactcggcgaatggtggacccaatttcaagctgcc
ggcgaagccgaacaaaaaaaaatgactcagccgacacaaaaatcgaatcgcaaaccgctt
aagcggaggcgaccaaggcccaataaaccgagcaatgccgatacagcgaaagactaa
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