Methylotuvimicrobium alcaliphilum: MEALZ_0937
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Entry
MEALZ_0937 CDS
T01649
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mah
Methylotuvimicrobium alcaliphilum
Pathway
mah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MEALZ_0937 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mah03019
]
MEALZ_0937 (pnp)
03016 Transfer RNA biogenesis [BR:
mah03016
]
MEALZ_0937 (pnp)
Enzymes [BR:
mah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MEALZ_0937 (pnp)
Messenger RNA biogenesis [BR:
mah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MEALZ_0937 (pnp)
Transfer RNA biogenesis [BR:
mah03016
]
Prokaryotic type
tRNA degradation factors
MEALZ_0937 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
KH_SLS1_2
KH_2
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
CCE22631
UniProt:
G4T3D9
LinkDB
All DBs
Position
1050983..1053067
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AA seq
694 aa
AA seq
DB search
MNPIRKEFQYGDQLVTLETGEIARQADGAVMIDMEGTTLLVTVVGKKEANSGGDFFPLTV
NYQEKSFAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPDGFTNEVQIIATVLSLN
PEVDPEIPALIGASAALSISGLPFNGPVGAARVGYKAGQYLLNPTPSSLAESQLELVVAG
TEHAVLMVESEAQCLSEEVMLGAVLFGHEQMQTAIVAIKELAAMVNKAPMAWQPVAANTE
LESLVVAEVEAGIKAAYQVPEKLVRQEQLKEIRNAAVDKLTADEQYSESDIRGIIENLEK
KIVRGSILEEGKRIDGRDLKTVRPISIRTGVLPRTHGSALFTRGETQALVVATLGTERDS
QVIDALEGEYRESFMLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGVQAVLPNMDEFP
YVVRVVSEVTESNGSSSMASVCGSSLALMDAGVPIKSPVAGIAMGLIKEGDQFAVLSDIM
GDEDHLGDMDFKVAGSEEGVTALQMDIKIDGITAEIMKTALEQAKQGRLHILGEMNKSLS
ETRGQMSDYAPRIISFKIDPSKIREVIGKGGATIRSITEQTGASIDLTDDGIVKVASVDK
QAGEEARRLIEEITAEVEVGKTYEGKVARLMDFGAFVTILPGKDGLVHISQISDEHVDKV
SDKLSEGDVVKVKVLEIDRQGRVRLSMKAVDIEE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccgattcggaaagaatttcagtatggcgatcagctcgttacgctggaaaccggt
gagatagctcgtcaggcggacggcgctgtaatgatcgacatggaggggaccacccttcta
gtgacagtcgttggaaaaaaagaagcaaacagcggcggagatttttttccattgactgtc
aattatcaggaaaaatcttttgccgcgggtaagattcccggcggtttctttaagcgagaa
ggccgaccaagcgaaaaagaaacgttaacctcccgtctcatcgatcgtccaatccgcccc
ttatttccggatggctttaccaacgaagttcaaatcatagccaccgttctttcactgaat
cccgaagtcgatcccgaaattcctgccttgatcggagcttctgcagcgttatcgatttca
gggttacccttcaacggtcctgtcggcgcggcgcgagtgggttataaagccggacagtat
ttattgaatccgacgccctcttcattagctgagtcgcaattggaattggttgttgccggt
accgaacatgcggtactcatggtcgaatccgaagcgcaatgtttgtccgaggaagtgatg
cttggtgccgtattgttcggtcatgagcaaatgcaaactgctatcgttgcaattaaagaa
cttgccgctatggttaacaaggcgccgatggcctggcaaccggtggctgctaacaccgag
ctggaatctttggtggtagctgaagtggaagccggaattaaggcggcatatcaagtccct
gaaaaactggtcagacaagagcaactgaaagaaatcagaaatgctgcagtcgataagttg
acggctgatgagcaatatagcgaatccgacattcgcggtatcatcgaaaatctcgaaaag
aaaatcgtacgcggctcgattcttgaagaaggtaagcgtatcgacggccgcgacttgaaa
acggtcagacctatttcaattcgtaccggcgtgttgccgagaactcacggttcggcgttg
tttactcgcggcgaaacgcaggccttggttgtcgcgaccttgggtaccgaacgtgattcg
caggtcatcgatgctctggaaggcgaataccgtgaaagtttcatgctgcattacaatttc
ccgccttattgtgtcggtgaaaccggttttgtcggttctccgaaacgccgggaaatcggc
cacggccgcttggcaaaacgcggcgttcaagccgtattgccgaacatggatgaattcccc
tatgtcgtgcgcgtcgtttccgaagttaccgagtcgaacggttctagctcgatggcgtcg
gtgtgcgggagtagcttggcgctgatggacgcaggcgtgccgattaaatcgccggttgcg
ggtatcgcgatgggtttgattaaggaaggcgatcaattcgccgtgttgtccgatatcatg
ggcgatgaagatcatttaggcgacatggacttcaaagttgccggttccgaagagggcgtt
accgcgctgcagatggatatcaagattgacggaattaccgccgagatcatgaaaaccgca
ctcgagcaagccaagcagggccgcttgcatattttgggcgaaatgaacaaatcgttgtcc
gagacgcgcgggcaaatgtccgattatgcgccgcgcattatttcgttcaaaatcgatcca
agtaaaatccgcgaagtcatcggtaaaggcggtgcaacaatccgcagtatcaccgaacaa
accggtgcaagcatcgatttgaccgatgacggcatcgttaaagtcgcttccgtcgataaa
caagccggagaagaagcgcgtcgtttgatcgaggaaattacagcggaagtcgaagtcgga
aaaacctatgagggtaaagttgcccgattgatggacttcggcgcattcgtgacgattctg
ccgggtaaagacggtttagtgcatatttctcagatttcggacgagcatgtcgacaaggtt
agcgataagctatccgaaggcgatgtcgtcaaagtcaaagtactggaaatcgatagacaa
ggtcgtgtcagattgagcatgaaagctgttgatatcgaagagtaa
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