Methylotuvimicrobium alcaliphilum: MEALZ_3120
Help
Entry
MEALZ_3120 CDS
T01649
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mah
Methylotuvimicrobium alcaliphilum
Pathway
mah03030
DNA replication
mah03430
Mismatch repair
mah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MEALZ_3120 (dnaE)
03430 Mismatch repair
MEALZ_3120 (dnaE)
03440 Homologous recombination
MEALZ_3120 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mah03032
]
MEALZ_3120 (dnaE)
03400 DNA repair and recombination proteins [BR:
mah03400
]
MEALZ_3120 (dnaE)
Enzymes [BR:
mah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MEALZ_3120 (dnaE)
DNA replication proteins [BR:
mah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MEALZ_3120 (dnaE)
DNA repair and recombination proteins [BR:
mah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MEALZ_3120 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CCE24785
UniProt:
G4T343
LinkDB
All DBs
Position
complement(3623993..3627487)
Genome browser
AA seq
1164 aa
AA seq
DB search
MQPSFVHLRLHTEFSLVDGIVRIKPLIKALADMNMPAVAVTEQSNLFSLVKFYRAALGQG
IKPVSGADVHIFNPDDPSSPYCLTLLVKNLNGYTTLTELISKSYQEGQHQGVPMVQREWI
ADNHNGLIALSGAMSGDIGRALLAENVDEAKRLAEGWSHLFEDSFYLELQRVGKAEEERY
VAAAVDLAQQMDLPVVATNDVRFIRPEDFDAHEVRVCIHQGRVLDDNRRPKDYTNQQYLR
SSEEMQELFADIPEALENSVEIAKRCNLELTLGENYLPDFPVPEGMTIDDYLIEVSRQGL
EERFQQHPAFGSGSEEENRRVYYDRLETELKVITQMGFPGYFLIVADFIQWAKNSAIPVG
PGRGSGAGSLVAYVLKITDLDPIEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDYVA
RHYGRDHVAQIITYGSMAAKAVVRDVGRVLGFSYGFVDRLAKLIPFEIGMTLTKALQDSP
DLKQLYETEEEVKTLIDMAKSLEGVSRNAGKHAGGVVISPTKLTDFTPLYCEQGGGNLVT
QFDKDDVEAVGLVKFDFLGLRTLTIIDWALETINRKKQQIGEAIVDISAIPRDDSPSYEL
LKKAQTTAVFQLESRGMKELIKKLKPDCFDDIIALVALFRPGPLESGMVDDYINVKHGAK
AEYAHPMLEPILKSTNGVILYQEQVMQIARELAGYTLGGADMLRRAMGKKKPEEMAKQRE
IFTEGAVANNIEESVATYIFDLMEKFAGYGFNKSHSAAYALVAYQTAWLKAHYPAEFMAA
VLSSDMDNTDKVVVLIEECREMKLAICPPDLNESNYRFTVNDKGQIVYGIGAIKGVGESA
IEDLLKEREANGSFAGLYDLCKRVDLRKVNRRVLEALIRAGAFDRIDANRAAHLAELPIA
LRVAEQHVKMAQTGQNDLFGLGMPDEDDKIQEDVYTTQAEPWTESERLAAEKQTLGLFLT
GHPITQYESELKHIVHGKIAKILGDVERTRGKMEARTAGLVVELRTRQNKNGKTMGFATL
DDRSGRLELAIFGDSYERYRDLLSKDALLVAEGGVAIDDFSGMLRLTVDKLYSIEDARNQ
YARCLALQWANTDEQSDAKSFVDKLDETLQPFKGGSCPIVLAYRSATAKSSLQFGDEWRV
HPSDELVLRLKRLLGAEAVEVRYR
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccttcattcgttcatcttagacttcataccgaattttccctggtcgacggcatt
gttcgaatcaagccgctgattaaagccttggccgacatgaacatgccggccgtcgcggtc
accgaacaatccaatcttttttcgttggtcaagttttaccgcgccgcgcttgggcaaggg
ataaagcctgtttccggcgccgatgtgcacatcttcaatccagacgatccgtcatcgcct
tactgtctaacgctgttggttaaaaatcttaatggttatacgacgctgaccgaattgatt
tcaaagtcttatcaggaaggtcagcatcaaggcgtgcctatggtgcaacgcgaatggata
gccgacaatcataatgggctgatcgccttatccggagccatgagcggcgatatcggcagg
gccttgttggcggaaaatgtcgacgaggccaaacggctggccgagggatggagtcattta
ttcgaagattccttttatctcgagttgcaacgtgtcggtaaagccgaggaagaacgctat
gtggcggcggctgtcgatttggctcaacaaatggatctgccggtcgtcgcgactaatgat
gtccggtttattcgtccggaggatttcgatgcgcatgaagttagggtctgtattcatcaa
ggacgggttttggatgacaatcggcggccgaaagattacaccaatcaacaatatctgcgt
agcagtgaagaaatgcaggagttgttcgccgatattcctgaagccctggaaaattcggtc
gaaatcgccaagcgttgtaatctggagctgacgctcggcgaaaattatttgcccgacttt
ccggttccggaaggtatgacgatcgatgactatctgatcgaagtgtcccgtcagggactc
gaagagcgctttcaacaacacccggctttcggttccggtagcgaagaagagaaccgccgg
gtttattacgacaggctcgaaaccgagctgaaagtgattacgcagatgggctttcccggt
tactttctgatcgttgccgatttcatccaatgggccaagaacagcgcgattccggttggg
ccgggcaggggttcgggcgccggctcgctggttgcctatgtcttgaaaattaccgacctc
gatccgatcgaattcgatcttttattcgaacgcttcttgaatccggagcgggtttcgatg
cccgacttcgacgtcgatttctgtatggaccggcgcgatgaggttatcgactatgtcgcg
cgtcattatggtcgcgaccatgtcgcccagatcattacctacggttcgatggcggccaag
gccgtagtacgagatgtcggccgggtgctcggtttttcctacggcttcgtcgatcgcttg
gcgaaactgattcctttcgaaatcggcatgacgctgactaaggcgctgcaggatagcccc
gatctcaaacagttgtacgagaccgaagaggaagtcaagacgctgatcgacatggcgaaa
tcgcttgagggggtttcgcgtaatgccggcaagcatgccgggggggtcgtaatttcgccg
accaaattgactgatttcacgccgctttattgcgagcaaggcggcggtaatctagtgacg
cagttcgacaaggacgatgtcgaggcggtcggtctggtcaagttcgactttttgggcctt
cgaacgctgacgatcatcgattgggcgctcgagacgatcaatcgaaaaaagcagcaaata
ggcgaggctatcgtcgatattagcgcgattccgcgcgacgattcgccctcctatgaatta
ttgaagaaagcgcagacgaccgcagtatttcagttggaatcgcgcggcatgaaagagttg
atcaaaaagctcaagcccgattgtttcgacgatattatcgctttagtggcattgtttcgg
cccggtccgctcgagtctggcatggtcgacgattacatcaacgtcaagcacggtgcaaaa
gccgaatatgcccatcccatgttggagccgattcttaaatcgaccaacggcgttattctg
tatcaagagcaggtcatgcagatcgctcgtgaactggccggctataccctcggcggtgcg
gacatgctgcgtcgcgcgatgggtaagaaaaaacccgaggagatggccaagcagcgcgaa
attttcacagaaggtgcggtcgcgaataacatcgaggaaagcgtcgcgacttatatcttc
gatttgatggaaaagtttgccggctacggtttcaataaatcgcattcggcagcctatgcc
ttggtcgcttatcaaaccgcctggctgaaggcgcattatcctgccgagtttatggcggcg
gtactgtcttccgatatggacaataccgataaagtcgtggtgttgatcgaagaatgccgc
gaaatgaaattggctatttgcccgcccgatctcaacgaatcgaattatcgtttcacggtc
aacgacaaagggcaaatcgtgtatggaatcggtgcaatcaagggggttggcgaatccgcg
atcgaggatttattaaaagaacgcgaagcgaacggatctttcgcagggctgtacgattta
tgcaagcgcgtcgatttgaggaaggtcaatcgtcgcgtgcttgaagcattgattagggcg
ggtgcgttcgatcggattgatgccaatcgagcggcgcatttggcggaattgccaattgca
ttacgggtggccgaacagcacgtcaaaatggcccaaaccggtcaaaacgacttgttcgga
ttgggcatgcccgatgaggacgataagatacaggaggacgtttatacgactcaagccgag
ccttggaccgaatcggaacgattggctgcggaaaagcaaaccttgggtttgtttttgacc
ggtcatccgattacgcaatatgaatcggaattgaagcatatcgtgcacggcaagattgct
aagatcttgggtgatgtcgagcgcacgcgaggaaaaatggaggcgcgcaccgcaggatta
gtcgtggaattacggacgcggcaaaataaaaacggcaaaacgatggggtttgcgacttta
gatgaccggtccgggcgtcttgaattggcaatcttcggcgacagctacgaaagataccgc
gatttattgtctaaggatgcgttgttagtcgcagagggcggtgttgcgattgacgatttt
agcggcatgctgaggttgacggtcgataaactatacagtatcgaagacgcacgcaatcaa
tatgcccgatgtcttgcgttgcagtgggcgaatacggatgaacagagcgatgcaaagtcg
ttcgtcgataagctcgatgagacgctgcagccgtttaagggcggttcttgccctattgtg
cttgcttatcgttccgcaacggcaaagtcatcgctacaattcggcgatgaatggcgcgtg
catccttcggatgaattggtcttgcggttaaagcgtttgctgggggcggaggctgttgag
gttagatataggtga
DBGET
integrated database retrieval system
