Methylotuvimicrobium alcaliphilum: MEALZ_3328
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Entry
MEALZ_3328 CDS
T01649
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mah
Methylotuvimicrobium alcaliphilum
Pathway
mah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MEALZ_3328 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mah03021
]
MEALZ_3328 (rpoA)
03400 DNA repair and recombination proteins [BR:
mah03400
]
MEALZ_3328 (rpoA)
Enzymes [BR:
mah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MEALZ_3328 (rpoA)
Transcription machinery [BR:
mah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MEALZ_3328 (rpoA)
DNA repair and recombination proteins [BR:
mah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MEALZ_3328 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
CCE24992
UniProt:
G4STJ4
LinkDB
All DBs
Position
complement(3850823..3851833)
Genome browser
AA seq
336 aa
AA seq
DB search
MQNSISGLLRPRLVEVVSKSANHSRIVIEPLERGFGHSLGNALRRVLLSSIPGCAVTDIE
IEGVLHEYTAIEGVQEDVIDIILNLKKLAVLLHSKDDVVLTLSKSGVGVVTAADIQLPHD
VEIVNPDLVIANLTQDKQFNMKIRVRRGRGYEPVSARKQQTDNPIIGSLQVDASYSPIIK
VAYQVESTRVEQRTNLDKLIVELETNGTVDPEETIKLAATILHDQLSVFVDFEKVAPPVD
EKEAPQEGPDIDPVLLRPVDDLELTVRSANCLKAENIFYIGDLIQRTEVELLKTPNLGKK
SLTEIKDVLALKGLSLGMRLENWPPDNLIDQNQSSF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatagtatttccggcttattaagacctcgtcttgttgaggtggtaagcaaatcc
gctaatcattcaaggattgtaatagagcctcttgagcgtggattcggacattcgcttggt
aacgctttgagacgggtgttattgtcttcgattcccggttgcgcagttacagatatagaa
attgaaggtgtgctgcacgaatataccgcgattgagggcgttcaagaagatgttattgat
atcatcttaaacttgaaaaagttagcagtccttttgcactcgaaagatgatgtcgtattg
actctttccaagagcggtgtcggtgttgttactgctgcagatattcagttacctcacgat
gtagaaattgttaatcctgacttggttattgcaaatttgacccaggataagcaattcaat
atgaagattcgcgtcagaagaggtcgagggtatgagccggttagtgcgcgaaaacagcaa
accgataatcctatcattggtagtctgcaagttgatgcttcgtatagtccgattataaaa
gttgcttatcaagtcgagagtactcgcgtagagcagagaacgaatctcgataagttaatc
gttgagctagagacaaatggtacggttgatccggaagagactataaagctagcggcaacc
atattgcatgatcaattatccgttttcgtggattttgaaaaggttgctcctcctgtcgat
gaaaaagaagcgcctcaagaaggtccggatatcgatcctgttttgttgagacctgttgat
gatttagaattaactgttagatcagcaaactgtttaaaagcggaaaacattttttatata
ggtgacttgattcaaagaactgaagttgagttgcttaaaaccccaaatttaggtaaaaag
tccctcacggaaatcaaagatgtgctggctttaaaaggattatctctaggtatgcgccta
gaaaattggcctcctgataatctgattgatcaaaatcaaagcagtttttaa
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