Methylotuvimicrobium alcaliphilum: MEALZ_3818
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Entry
MEALZ_3818 CDS
T01649
Name
(GenBank) Exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mah
Methylotuvimicrobium alcaliphilum
Pathway
mah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MEALZ_3818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mah03400
]
MEALZ_3818
Enzymes [BR:
mah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MEALZ_3818
DNA repair and recombination proteins [BR:
mah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MEALZ_3818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CCE25474
UniProt:
G4SZ17
LinkDB
All DBs
Position
4401510..4404650
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AA seq
1046 aa
AA seq
DB search
MFILHSSNKTENLLEHLAAVIETRPLSSPFVKEVFLIQSQGMERWLSQQLASRLGVWGNY
EFLFPGRFFSTLAQRIDSRLNDEAFNRHVLHWRFEALLRELDNEIFAPLNNYLVGETAAL
KRYQLALQLALIFDQYQIMRPDMLAAWQQGETLYDTETERWQRALWQRITENAGTRHRGS
LWLEVIERFNSAPPGQFSAVLPERISIFGVNTMPPLFLGFLQGLANHAQVHLYLLNPAQA
FWADLATKRQRIDREDPGGHPLLAALGQQGREFQEMLLEQVQFELELDSFEQDEPSTVLR
QLQNDILNNDSESTPLTRDGSIAIHACHSRMREVEVLKNQLLAALENDSELDLRDIVVMA
PDIELYEPFISAVFDDIQHAVADRSLRLSNHALDAFIVFLKLSQSRFGWRSVLDLLEKPS
VYPGFGLSETDLELIKHWVRDTQVRWGKSAEHKRELGLPELDENTWQAALGRLLMGYAVG
TDDDFVDGVLPYIDIEGSSALALGGLNDFMQLLFRAGNDLSMAKSLKAWGEKLYYYADQL
LPEADAVERQQLNELLAELTERLPEIHNAPIEWQVVCAWLEGRLEEHKSSNGFLRGQLTF
CSMLPMRSIPFKVIALLGMNDGEFPKVDRNPTFDLLAANFRKGDRSRRSDDRYQFLEILL
STRQQLIVTYIGRSISHNETIPPSVVISELLAVLRDHYGLDNGVTYHPLQAFSPRYFEPE
SALFSYSEADCQAAAALVKPKPEPAPWWQGSLEDETDQTIIEIGELFAFYRHPQKYFMQR
RLDVRFNGIAADAEEREPFAIGQLDGYAIYHEWIDGVLHDKPLTAQKLKAQGRWLSGVAG
DLEFARQQQSIDAFAEAIKAKALGKPLEDLSVDLAVGSYRLVGKLGNRYERGSLFYRYAD
LKGKDFMLAWLHHLMINQIEPQQTCLIALDQDITFEPDYCALGELEAWIEIYRQGLHRPD
AFFVEPAFAYVKQAHKLSQSSRAAKPAIESAIDQLTRAIEKAYEPELRKLFLEGYNPVEL
LNEIFEDHCRTLLLPVWELIDGKSED
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgttcattctgcacagttccaataaaaccgaaaatctgctcgaacatttggcagccgtc
atcgaaaccaggccgctaagttcaccgtttgtcaaagaagtgtttctgattcaaagccag
ggtatggaacgttggttgtcgcagcaattggcaagccggctcggcgtctgggggaattat
gagtttttatttccgggacggtttttcagtaccttagcacaacgaatcgacagtcgatta
aatgacgaagccttcaatcgccatgtgctgcattggcgcttcgaagcactgcttcgcgaa
ctcgacaacgaaatatttgcgccgctgaataattatttggtcggcgaaaccgcggcctta
aaacgttatcagctagcgttacaattggccttgattttcgaccaatatcaaatcatgcgt
ccggatatgctggctgcctggcagcaaggcgaaacgctttacgacacggaaaccgaacgc
tggcaacgcgcgttatggcaacggattaccgaaaatgcaggcacgaggcatcggggtagt
ttatggctggaagtgatcgagcgttttaattcagcgccgcctggacaattttccgccgtt
ttgcctgagcgaatttcgatcttcggcgtcaataccatgccgcccctgtttctcggtttt
ttacagggattggcgaatcatgcgcaagtgcacttgtatttgctcaaccccgctcaagct
ttttgggcggatttggcgactaagcgtcagcgtatcgatcgggaggatcccggcgggcat
ccgctgttggcggcattgggtcaacaaggccgcgaatttcaagagatgttgttggagcag
gtgcagttcgaattagagctggacagtttcgaacaagacgagccgagcacggtactgcgg
cagctgcaaaacgacattctcaataacgacagcgaatcgacgcctttaacccgcgacggg
tccatcgctattcatgcgtgccattcccgtatgcgcgaagtcgaagtcttgaaaaaccaa
ctgttggccgcattagaaaacgactccgagttggatctgcgcgatatcgtcgtaatggcg
ccggatatcgaactatacgaaccgtttatttccgcggtattcgacgatattcagcatgcg
gtggccgaccgcagtctgcgcttgagtaatcatgcattggatgcttttattgtttttttg
aagctgagccaaagtcggttcggttggcgctcggtcctggatttgctcgaaaaaccgtcg
gtttatccgggcttcggcttgtccgaaaccgatttggaattgatcaaacattgggttcgg
gatacgcaagtgcgttggggaaaatcggccgaacataaacgcgaattgggcctgcccgag
ctcgatgaaaatacctggcaagccgcattgggtcgtttgttgatgggttatgcggtcggc
accgacgacgattttgtcgacggcgtcttgccttatatcgatatcgaaggttcttcggcg
ttggcgcttggcggcttgaacgattttatgcaattgttgtttagagccggcaatgattta
agcatggctaaatcgctcaaggcatggggcgaaaagctttattattatgccgatcaatta
ttgcccgaagccgatgccgtcgagcgccaacaactcaacgaattattggcggaattaacc
gaaagattgcccgaaattcacaacgcgccgatcgagtggcaagtcgtctgcgcctggctt
gaaggccgattggaagaacacaaatcgtcaaacggctttttacgcggtcaactcacgttt
tgttcgatgctaccgatgcgctcgattccgtttaaagtaatcgccttgctcggtatgaac
gacggcgagtttccgaaagtcgaccgcaatccgaccttcgatttgcttgccgccaatttc
cgcaagggcgaccgctcacgccgttccgacgaccgttatcagtttctggaaatcctgctg
tcgacgcggcaacaattgattgtgacttatatcgggcggtcgattagccataacgaaacg
ataccgccttcggtcgtaatcagcgaactgctcgccgtgcttcgcgatcattacggcctg
gacaatggcgtgacctatcatccgctacaggctttcagcccgcgttatttcgagccggaa
tcggctttgttcagttattccgaggccgattgccaggcagcagcggcgttggttaagccc
aaaccggagccggcaccttggtggcaaggcagtttagaggacgaaaccgaccaaacaatc
attgaaataggcgaattgttcgcattttaccgacatccgcaaaaatatttcatgcaacgc
cgactcgatgtccgtttcaacggcattgcagcggatgccgaggagcgcgaacccttcgcg
atcggtcaattggacggttatgcgatttatcacgaatggatcgatggggtactgcacgac
aaaccgttgactgcacaaaaactgaaggcacaggggcgatggctatcgggcgtggccggc
gatctcgagtttgcccggcagcaacaaagcatcgatgcctttgccgaagcaatcaaggcc
aaggcgctcggcaaaccgctcgaggatttatcggtcgatctggcggtcggaagttatcgg
ttagtcggtaaactcggcaatcgttatgagcgcggcagtttgttttatcgttacgccgat
ttgaaaggcaaggattttatgcttgcctggttgcatcatctgatgatcaatcaaatcgaa
cctcaacagacttgcttgatcgctctcgaccaggatataacgttcgagccggactattgt
gcgttaggcgaattggaagcttggattgaaatctatcggcaaggattgcacagacccgat
gcgtttttcgtcgagccggccttcgcttatgttaaacaagcgcataaattgtcgcaaagc
agccgcgcggcgaaaccagccatagagtcggcaatcgaccaactaacccgtgctatcgaa
aaagcttatgaacctgagcttagaaaattatttctcgaaggctacaatccggtggaattg
ttgaatgagatatttgaagaccattgccgaaccttactgcttccggtttgggagctcatt
gacgggaaatctgaggattag
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