Methylotuvimicrobium alcaliphilum: MEALZ_3960
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Entry
MEALZ_3960 CDS
T01649
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase rhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mah
Methylotuvimicrobium alcaliphilum
Pathway
mah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MEALZ_3960 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mah03019
]
MEALZ_3960 (rhlB)
Enzymes [BR:
mah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MEALZ_3960 (rhlB)
Messenger RNA biogenesis [BR:
mah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MEALZ_3960 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Thioredoxin_8
Motif
Other DBs
NCBI-ProteinID:
CCE25616
UniProt:
G4T0L2
LinkDB
All DBs
Position
complement(4561102..4562418)
Genome browser
AA seq
438 aa
AA seq
DB search
MNTTHLTQTRFSNLELSDSILRGLTEAGFTHCTPIQDRSLPLSLRDKDIAGQAQTGTGKT
ATFLLATFQRLINDESEKIKNPRAVILAPTRELAIQIHKDALQLGKYLNLKLALIYGGTD
YKKQMDTIKSNVDIIIGTPGRIIDFYRQGAFTLDNVQVMVLDEADRMFDLGFIKDIRFLL
RRMPPADKRLNMLFSATLSYKVTELAYEHMNQPVLIKIETEEVTSKAIQQSAFCPSNEQK
IPLLLGVLKKYAPQRSIIFVNTKRCAERLNDYLNANGFVTAVLSGDVPQEKRQRLLTDFQ
ENKIRLMIATDVAARGLHIADVSHVINYDLPQEVEDYVHRIGRTARFGASGEAISFICEE
YAYSMPDIETYIGQKVPIQPITADLLPEVVKPERKPHPQKPARNNQGKYPEKPKKKPVQR
NKSSQAATNPASTPENPQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaacgcatcttactcaaacccgattcagcaatttggagttatccgattcgata
ttgcgcggactgaccgaggccggctttacgcattgtactccaatacaggatcgttcgttg
cctttgtcattaagagataaggatatcgccgggcaagctcaaaccgggaccggcaaaaca
gcaacctttttactggctacttttcagcgcttaatcaacgacgaaagtgaaaagatcaaa
aaccccagggcggttattttagcgccaacccgggagcttgctattcagattcataaagat
gccttacagttgggcaaatatttgaatcttaagctagcgctgatatacggtggcaccgat
tataaaaaacaaatggatacgatcaagtccaatgtcgatattattatcggcacaccgggc
cgtattatcgacttttatcggcaaggagcttttacgttggataacgtgcaagtaatggtg
ctcgatgaagccgaccggatgttcgatttagggttcatcaaggatattcgatttctgtta
agaaggatgccgccggccgataagcgattgaatatgttgttttcggcaactttatcctac
aaagtgactgagctggcttacgagcatatgaatcagccggtactcatcaaaatcgagacg
gaagaagtcacctccaaggccattcagcaaagtgcgttttgtccgtccaatgaacagaaa
attccgctattgttgggtgtactgaaaaaatatgcgccgcaacgcagcattattttcgtc
aacaccaaacgttgtgccgaacggcttaacgactatctgaatgctaatggtttcgtcacc
gctgttttgagcggcgatgtccctcaggaaaaacgtcagcggctattgactgatttccag
gaaaacaaaattaggctgatgatcgcgaccgatgttgcggcgcgcgggctgcatatcgcc
gacgtgtcgcatgtgatcaattacgatctgcctcaggaagtcgaggattatgtccaccga
atcggcagaaccgcacgtttcggcgccagcggcgaagcgatcagttttatttgcgaggaa
tacgcctattcgatgccggacattgaaacttatatcggtcaaaaagtgccgattcaaccg
ataacggccgatttgctgcctgaagtcgtcaagcctgagcgcaagcctcatccgcagaag
cctgcacgtaataatcaaggtaagtatccggaaaaaccgaaaaaaaagccggtgcagcga
aataagtcttctcaagccgctacaaacccagcatcaactcccgaaaatcctcaatag
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