Micavibrio aeruginosavorus ARL-13: MICA_1110
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Entry
MICA_1110 CDS
T01630
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mai
Micavibrio aeruginosavorus ARL-13
Brite
KEGG Orthology (KO) [BR:
mai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mai03016
]
MICA_1110 (truB)
Enzymes [BR:
mai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MICA_1110 (truB)
Transfer RNA biogenesis [BR:
mai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MICA_1110 (truB)
Prokaryotic type
MICA_1110 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AEP09438
UniProt:
G2KNA5
LinkDB
All DBs
Position
complement(1095372..1096313)
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AA seq
313 aa
AA seq
DB search
MARRKKGIPIHGWIAVDKPLGVTSTQVVGKLRWLLNAQKIGHGGTLDPLASGILPIALGE
ATKTIAFCMDHTKTYSFTVRFGEQRSTDDAEGEVIATSDIRPTEDAIRAILPRFIGTIDQ
LPPRFSALKIDGQRAYDLARAGEDVDLAPRAVRIDSLELLALRGDEADFRCVCGKGTYIR
SLGRDLALELGSVGYISALRRDQVGPFTVNNAISLDFSADSSQIPPLEDMLLPVQTVLDD
IPALDLNEREAARLKNGQVLSFISRPDVDRLHRAGVVPDKSNPVTALALFNGTPVALVNI
DGIDIQPLRVLNL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcccgacgtaaaaaaggcattcccattcacggctggattgcggttgataaaccgttg
ggcgtgacctcaacgcaagttgtggggaaattgcgctggctgttgaatgcccagaagatt
ggccatggcggaacgctcgacccgttggccagcggcattttgccgatcgccctgggcgaa
gccaccaaaaccatcgccttttgcatggatcacacaaaaacctatagcttcacggtccgg
ttcggcgaacaacgctccaccgacgatgccgagggcgaggtgatcgccacatcggacatc
cgcccgaccgaagatgccatccgcgccatcctgccccgttttattggcacgattgaccag
ctgccgccccgcttctccgccctgaaaattgacgggcaacgggcctatgacctggcccgt
gcaggtgaggacgtggatctggccccccgggccgtccgcattgattccctcgaattattg
gccctccggggcgatgaggccgatttccgctgtgtctgcggcaaggggacctatatccgc
tccctgggccgggatttggcgctggaactggggtctgtgggctatatctccgccctgcgc
cgggatcaagttgggccttttaccgtaaacaatgcgatttctcttgatttctcggcggat
tccagccaaattccgccccttgaagacatgcttcttcctgttcagacggtgctagacgac
atcccggctctggatctgaacgaaagggaagcagcacggttgaagaacggacaggtttta
tcgttcatctcccgtcctgatgtggatcgactccaccgggccggcgtggttcccgataaa
tccaaccccgtgacggcgctggcgctgttcaatggcacacctgttgcgcttgtgaacatc
gacggcatcgatattcagccgcttcgcgtactgaacctttaa
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