Micavibrio aeruginosavorus ARL-13: MICA_122
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Entry
MICA_122 CDS
T01630
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mai
Micavibrio aeruginosavorus ARL-13
Brite
KEGG Orthology (KO) [BR:
mai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mai03400
]
MICA_122 (addB)
Enzymes [BR:
mai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MICA_122 (addB)
DNA repair and recombination proteins [BR:
mai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MICA_122 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AEP08469
UniProt:
G2KMT2
LinkDB
All DBs
Position
complement(124489..127590)
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AA seq
1033 aa
AA seq
DB search
MGAADHKLTLFTIPAGVAFADALAHGLLDETRGDPQGLSSIHLLLPTRRATRTMQNAFLR
LSKGAPILLPRLSALGEVDEDSLSLESIASSGNAVALNLPPAMPKIRRQILLARMIMEWK
TRVHSPDQAFALAGTLGRLIDQCYMEGVTLDALPALVPDEFADHWRVTLDFLSIIMKLWP
ALLDAHGMIDAADRGGRLTHALADHWDATRPTQRIIAAGSTGSIPATARLLRVIAGLPNG
SVILPALDRDMDDGSWAALDDSHPQHALKKLLHGMDENLHRHDVVLWPHTPPARTDINPG
VAQKQLNARQWLAREMMRPAATADAWTTLDPDTDTRTHVRDTLGRVRRMDAENPQEEAEA
IALLLRETLETPGRTASLITPDRMLARRVSLIMNRWGIIMDDSGGQPLSTTRVGIFLRLI
ARAAIEQYAPAALLAAVKHSLMRWDDNDADGGRGMVRALDRHYLRGPAPAHGWDGLIAHI
NAKREAQIARGHDAPPDVAPLIDHLRTCFAPFDDLLQGDADTLRPLPSWLTAHIKVAEHL
SRADTIWTGEDGEAAATVLAELHGELAQAFSGDMNAMPPMSLDDYLSIISGMMEGVNIRP
AYGTHPRLSILGQIEARMTQADCVILAGLNDGTWPPDPGHDPWMSRPMRKQFGLPPTEQM
VGFAAHDFACGFCAPTVYLSRSKRVDGTPTVPSRWLQRLDTVLQALDIPPEHLHDHPALH
RARMFSDDGARIAAATRPAPTPPADRRPMTLPVTDIETWMRDPYALYAKRILRLRKLDML
DKPEDAASRGTLIHEVFEHFVSDHMHEWPDDAQSRLITLAHDQMKAHMDDPRLWGFWWPR
MEAAIDHFVTLETAQRIHSKPWALEATGTLPISLDDGSVFTLTAKADRIDRSTIDGRATV
IDYKTGTLPSKKAIEAGLAPQLPLEGAMILHGGFNDSGPKPSVDGLRAFTAWDGSGRKNP
TILNIEEGDAVHLATYAHNGLRDLVTAFKNPATPYYSLPNPANAPKYRDYDQLARVQEWV
VLSDADDEAEDAA
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagcggatcacaagctgaccctgttcaccattccggcgggggtggcctttgcc
gatgcgctggcgcatgggttgctggatgaaacgaggggcgatccgcagggtctgtcttct
attcatctgttgttgcccacacgccgcgcgacacggacgatgcagaatgcgtttttgcgt
ctgtccaagggcgcgccgattttgctgccgcgcctgagcgccttgggcgaggtggatgaa
gattcattgagccttgaatcgattgcttcatccgggaatgctgtcgccctgaacctgcct
cccgccatgccgaaaattcgccgtcagattttattggcgcgcatgatcatggaatggaag
acccgggtgcacagccccgatcaggcctttgccctggccggaacactggggcgcctgatc
gaccaatgctatatggagggggtcacgctggacgccctgcccgcgttggtaccggatgaa
tttgccgatcattggcgcgtgacgctggatttcctgtcgatcatcatgaaattgtggccc
gccttgctggacgcgcacggcatgattgatgcggcggaccgcggtggccgattgacccac
gcgctggccgatcattgggatgccacgcgcccgacccaacgcattatcgccgccggttca
accgggtccattcccgccacggcccgtttattgcgcgtgattgcgggattacccaatggg
tcggtgatcctgcccgcgctggatcgtgatatggatgatggcagttgggcggcattggat
gattcccacccgcaacatgcattgaaaaaattactgcatgggatggatgaaaatttgcat
cgccatgacgttgttctctggccacatacaccacccgcacgcaccgacatcaatccgggc
gtggcccagaagcaattaaacgcccgccaatggctggcgcgtgaaatgatgcgccccgcc
gccaccgccgatgcgtggacgacattggacccggatacagacacccgtacccatgtgcgc
gacacgttgggccgcgtgcgccgcatggatgccgaaaacccgcaggaagaggccgaggcc
attgcccttctcttacgcgaaacattggaaacaccgggacgcacggcatcactgatcaca
ccggaccggatgctggcccgccgggtcagtttgatcatgaatcgctggggcatcattatg
gatgattccggcggccaaccgctcagcaccacacgggttggtattttcctgcgcctgatt
gcacgggcggcgattgagcagtacgcccccgccgcgttgctggccgccgtgaaacattca
ttgatgcggtgggatgacaatgatgcggatggcgggcgcggcatggtccgggcgctggat
cgccattatctgcgcggccccgccccggcccatggatgggatggattaatcgcccatatc
aacgccaaacgcgaagcgcaaattgcacgcggccatgatgcgccgccggatgttgcgccc
ttgatcgatcatctgcgtacctgtttcgcaccgtttgatgatttattgcagggtgatgcg
gatacgctgcgccctttgccctcctggctgaccgcgcatatcaaggtagccgagcactta
agccgtgccgatacgatctggaccggcgaagatggcgaggcggcagccaccgttctggcc
gaattgcacggcgaactggcacaggccttttccggtgatatgaacgccatgccgccgatg
agtctggatgattatctatccatcatcagcggcatgatggagggcgtcaacatccgcccc
gcttatggcacccacccgcgcctgtccattctgggccagatcgaagcacggatgacccaa
gccgattgcgttattctggccggactcaacgatggcacatggccccccgatcccggccat
gacccgtggatgtcgcgcccgatgcgcaagcaattcggcctgccgcccacggaacaaatg
gtcggatttgccgcgcatgattttgcctgcggtttctgcgcgcccactgtgtatttaagc
cgcagcaagcgggtggatggcacgccgaccgttccgtcccgctggttgcaacggctggat
acggtgttacaggcgctcgatatcccgcccgaacatttgcacgaccaccccgccctgcac
cgtgcgcggatgttcagcgatgatggtgcacgcattgccgccgccacgcgccccgcgccg
acaccaccagccgatcgccgcccaatgacattgccggtcaccgacattgaaacatggatg
cgcgatccctatgccctgtatgccaaacggattttacgcctgcgcaaactggacatgctg
gacaagcccgaagatgcggctagccgcggcacgttgatccatgaagtgttcgaacatttc
gtatcggatcatatgcacgaatggccggatgatgcacaaagccgtttaatcacgctggcc
catgaccagatgaaagcccacatggatgatccacgtttgtgggggttctggtggccgcgc
atggaagcggcgattgaccatttcgttacgctagaaaccgcgcagcgcatccattccaaa
ccatgggcgctggaggccacaggaacattaccgatttccttggatgatggcagcgttttt
accctgaccgccaaggccgaccgcattgaccgcagcacgatcgatggccgcgccaccgtg
attgattacaaaaccggaacattgcccagcaaaaaagcgatcgaggccggattggccccg
caattgccattggaaggggcgatgattctgcatggcgggtttaacgatagcgggccgaaa
cccagcgtcgatggactgcgcgcttttaccgcatgggatggatcgggccggaagaacccc
accattctgaacatagaagaaggcgatgccgtgcatctggccacctatgcccataacgga
ttgcgcgatctggtcaccgcattcaaaaacccggcaacgccgtattacagcctgcccaac
ccggcgaacgcacccaaatatcgtgattacgatcaactggcccgtgtgcaggaatgggtg
gtgttgagcgatgcggatgatgaagcggaggatgcggcatga
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