Micavibrio aeruginosavorus ARL-13: MICA_1231
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Entry
MICA_1231 CDS
T01630
Name
(GenBank) pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mai
Micavibrio aeruginosavorus ARL-13
Pathway
mai00300
Lysine biosynthesis
mai00470
D-Amino acid metabolism
mai01100
Metabolic pathways
mai01110
Biosynthesis of secondary metabolites
mai01120
Microbial metabolism in diverse environments
mai01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
mai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MICA_1231
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MICA_1231
Enzymes [BR:
mai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MICA_1231
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AEP09554
UniProt:
G2KRJ2
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All DBs
Position
complement(1215301..1216824)
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AA seq
507 aa
AA seq
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MTNAVRKDDLCLADQMLGTTIDRSRPRVRAAIHPMIERFLADQALVFSLVDGIGSPLNIM
FPDHIADTIASFQKIYDDRQLQGRIFYTSKPNKSAALKKRAAMTNVGLDVSSEGELKNAL
ASGFHPSRIEATGPKNADYLSLCLQQDVLINVDNMTEMAQIIATQSLLPSGKKARILVRL
DGFKPDRVKFTAQDSAFANNVEHAPAIIDYLVAHKDVLDFHGFSFHFNAGDYIRRPPAIE
TILQLTFECMNRGLSPRGIDIGGGYRIRYAASQDEWNAYVEELKASVLGQRDSLTWNDSG
LGFRNEGGVLKGAPNFMEHYHKDDGPADLASVIDAPLPLFDGQSLSRILSDSLMDLYVEP
GRALLDQCGITLSRVNLNKQSMMGEQLVVLDMNRTNLNATQLKLMTDPVVLYRNQNRKPA
DDGVMYVGNLCLTHDMIQYHKTFPDFIPETGDVVAFINTAAYQMDFAETHVLQQRIAEKI
AVVETESGFRWFRDDLYNPLALKIGAY
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgccgtacgcaaagacgatctctgtctggccgatcaaatgttggggaccacg
attgaccgttcgcgcccccgcgttcgcgccgccattcacccgatgatcgaacggtttttg
gccgatcaagccctcgttttctctctggtcgatgggattggatcgccgttgaacattatg
ttcccggatcacattgcggatacgattgcctcgttccagaaaatatatgatgatcggcaa
ttgcagggacggattttttacacatccaaacctaacaaatccgccgcactgaaaaaacgc
gcggccatgaccaatgttggcttggacgtttcatccgaaggtgaattgaaaaacgcactg
gcgtccggattccatccatcacggattgaggcgacggggccgaaaaacgccgattatttg
tccttgtgcttgcaacaagacgtgttgattaacgtcgataatatgacggaaatggcgcag
attattgccacgcaatcccttctgccgtcggggaaaaaggcccgcattcttgtccgtctg
gatgggtttaaacccgaccgcgtaaaattcacggcgcaggacagcgcattcgccaacaat
gtcgaacacgccccggcgatcatcgattatctggtcgcgcataaagatgttctggatttc
catgggttcagcttccacttcaacgcgggcgattacattcgccgcccgccggccattgaa
accattctgcaactcacctttgaatgcatgaaccgtggcctgtccccgcgcgggattgat
attggtggtgggtatcgcattcgctatgccgcatctcaggatgaatggaacgcgtatgtt
gaggaattaaaggcctccgtccttggccaacgcgatagcctgacatggaacgattcaggc
cttgggttccggaatgaaggtggcgttttaaaaggcgcgccaaactttatggaacattac
cacaaggatgacggcccggccgatctggcctccgtcattgatgcgccattgccattgttt
gacgggcaatccttgtcccgcattctgtccgacagtttgatggatttgtatgttgaaccg
ggccgggcgttgttggatcaatgtggcatcaccttgtcccgtgtgaatttgaataagcaa
tccatgatgggtgagcaattggtggttctggatatgaaccgcaccaatttgaacgcaacc
cagttgaaattaatgacggacccggttgttttataccgtaaccaaaaccgcaaaccggcg
gatgatggggttatgtatgtgggcaacctctgcctgacccatgacatgatccagtatcac
aaaacattccccgactttatcccggaaacgggcgatgttgtggcgtttataaacaccgcc
gcgtaccagatggatttcgccgaaacccatgtgttgcaacaacgcatcgccgaaaaaatt
gctgttgttgaaacggaatccggtttccgctggttccgtgacgatctttacaatcccctc
gccctgaaaattggagcgtattaa
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