Micavibrio aeruginosavorus ARL-13: MICA_1583
Help
Entry
MICA_1583 CDS
T01630
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mai
Micavibrio aeruginosavorus ARL-13
Pathway
mai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mai00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MICA_1583 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mai03021
]
MICA_1583 (rpoD)
Transcription machinery [BR:
mai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MICA_1583 (rpoD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Fib_alpha
VAB2
Tachylectin
BEGAIN_coil
FlgN
Motif
Other DBs
NCBI-ProteinID:
AEP09898
UniProt:
G2KPS9
LinkDB
All DBs
Position
complement(1573855..1576350)
Genome browser
AA seq
831 aa
AA seq
DB search
MAVKKTGKTAKGSAAATKKVARVAKVAKKTEKVTRVPAKAPSKSKTQAASKSAAKTKTVK
QVAAKKPAPKAAPKSAPKSAKAAKPAPAKRAVKPAAKPVKAAKPTPSKAKAPVKQAVKQA
VKAPAKTAAKAKPVAKPVVKAATPKTPPVAKKPAPQPKVEDNKNKNAKGSIGSTKMSVKQ
TPPAVEEDAKAAKGKKAPAADKAAKGQQQEAATDDAPAKPRGSLESIVKKLVTKGKERGF
LTYDEINSAIPAEEFSSEQIEDAMATMSDVGIQLVDSEDDVEEAEKGEEYESSGNISSDD
SGRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGREMMIGGICESPLAIESMIAWYEA
LQKGDILLREVIDLDATYGDSSDGAPPADDLDEPEGESAEGAEGGEEENAVSLSAMEQEL
LPQVSESFSKIQKTYKKMQKVQQERFEHLQNAKQPPAATNKKYDDLKAQMVELMNEVRLN
NARIEQLVGRLYKMNREVVSLEGRLMRLAVDCGVKREDFLQNYYGSELDPNWLAKVAKLT
GKGWAKFAEKHVAEVGEIRTQIVTVTDDAGVPLGEFRRIVGTVQKGEREAARAKKEMVEA
NLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRS
IADQARTIRIPVHMIETINKLVRTSRQMMHEIGREPTPEELAERLHMPLDKVRKVLKIAK
EPVSLETPIGDEEDSTLGDFIEDKNALLPVDAAIHSNLRETTTRVLATLTPREERVLRMR
FGIGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFLDT
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcaagaaaacaggtaaaacagcgaagggttccgccgcagcaaccaagaaggtt
gcgcgcgtggccaaggtcgcaaagaagacagaaaaggtaacccgcgtgccggcaaaagct
ccgtcgaaatcaaagacacaggccgcgtccaaatccgccgccaaaaccaaaacagtgaaa
caggtcgcggcgaagaagcctgcgccgaaggcggctcctaaatcggcccctaaatcagca
aaggctgcgaaacccgcgccggccaagagggcggtgaagcctgcggccaaacccgtcaag
gcggcaaagccgacaccttcgaaagccaaggcccctgtgaagcaggcggtaaaacaggcg
gtaaaggcaccggccaaaaccgccgccaaggcaaaacccgtagccaagccggtggtgaag
gcggccacgccgaagacgccgccagtcgccaaaaaaccggccccccagccgaaggtcgaa
gataacaagaacaagaatgcaaaaggttccatcggttccacgaagatgagcgtaaaacaa
acacctcctgcggttgaagaagatgccaaggccgcgaagggcaagaaagcccccgctgcg
gacaaggccgcaaaaggacaacagcaagaagccgcaaccgatgacgctccggccaagccg
cgcggctctttggaatccatcgtcaagaaattggtgacgaagggcaaggaacgcgggttc
ctgacctatgacgaaatcaacagcgcgattccggccgaggaattttcttcggagcagatc
gaagacgcgatggcgaccatgtccgacgtgggcatccaactggtcgacagcgaagacgac
gttgaagaagccgaaaagggcgaagaatacgaaagcagcgggaacatcagctcggacgat
tccggtcggaccgatgacccggtgcgtatgtacctgcgcgagatgggctcggttgagctg
ctgtcccgtgaaggtgagatcgcgattgccaagcggatcgaagctggccgtgaaatgatg
atcggcggcatttgcgaaagcccgctggccattgaatccatgattgcctggtacgaagcg
ctgcagaagggcgatatcctcctgcgcgaagtgatcgacctggatgccacctatggcgat
tccagcgacggcgcaccgccggccgatgatctggacgaacccgaaggcgaaagcgccgag
ggcgcagaaggcggcgaggaagaaaacgctgtgtccctgtccgcgatggaacaggaattg
ctgccgcaggtgtctgaaagcttctcgaagattcagaaaacctacaagaaaatgcagaag
gtgcagcaggagcgttttgaacatctgcaaaacgccaagcagcccccggccgcaacgaac
aagaaatatgacgatctgaaagcgcagatggtcgagctgatgaacgaagtgcgtttgaac
aacgcccgtatcgaacagctggttggccgtttgtataaaatgaaccgcgaagtcgtcagc
ctggaagggcgcttgatgcgtctggccgttgattgcggcgtgaagcgcgaagacttcctg
caaaattactatggttctgaactggacccgaactggctggccaaggttgccaagctgacg
ggcaagggctgggccaagtttgccgagaagcatgttgccgaagtcggtgaaatccgcacg
caaatcgtgacggtgaccgacgatgcgggcgtgccgctgggtgaattccgccgtatcgtt
ggtacggtgcagaagggcgaacgcgaagctgcccgcgcgaagaaagagatggtcgaggcc
aacctgcgtctggttatctccatcgccaagaaatacaccaaccgtggcctgcaattcctg
gatttgattcaggaagggaacatcggtttgatgaaggcggttgataaattcgaatatcgc
cgtggttacaaattctcgacctatgccacatggtggattcgtcaggcgatcacgcgttcc
atcgcggatcaggcccgtacaatccgtatccctgtgcacatgatcgaaacgatcaacaag
ctggtccgcaccagccgccagatgatgcacgaaattggtcgcgagccgacgccggaagag
ctggccgaacgtctgcacatgccgttggacaaggtgcgtaaagttctgaaaatcgcgaag
gagccagtctccctcgaaaccccgatcggtgatgaagaagattcgacactgggtgatttc
atcgaggacaagaacgcgcttctgcccgttgatgcggccattcactcgaacctgcgtgaa
acaaccacgcgcgttctggcgaccctgaccccgcgtgaagaacgcgttctgcggatgcgt
tttggtatcggcatgaacaccgaccacacgctggaagaagtcgggcagcagttcaacgta
acgcgtgagcgtattcgtcagatcgaggcgaaggccttgcgcaaactgaaacacccaagc
cgctcgcgcaaactgcgcagcttcctggatacataa
DBGET
integrated database retrieval system
