Micavibrio aeruginosavorus ARL-13: MICA_2230
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Entry
MICA_2230 CDS
T01630
Symbol
polA
Name
(GenBank) DNA polymerase I family protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mai
Micavibrio aeruginosavorus ARL-13
Pathway
mai03030
DNA replication
mai03410
Base excision repair
mai03420
Nucleotide excision repair
mai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MICA_2230 (polA)
03410 Base excision repair
MICA_2230 (polA)
03420 Nucleotide excision repair
MICA_2230 (polA)
03440 Homologous recombination
MICA_2230 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mai03032
]
MICA_2230 (polA)
03400 DNA repair and recombination proteins [BR:
mai03400
]
MICA_2230 (polA)
Enzymes [BR:
mai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MICA_2230 (polA)
DNA replication proteins [BR:
mai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MICA_2230 (polA)
DNA repair and recombination proteins [BR:
mai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MICA_2230 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MICA_2230 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
AEP10533
UniProt:
G2KS25
LinkDB
All DBs
Position
2241472..2244300
Genome browser
AA seq
942 aa
AA seq
DB search
MAQANAQNVTDNNEIFLVDGSGYIFRAYYALPQNLTNPHGVPVGAVLGFVNMMTKLLADM
HAPFIAVIFDAARQNFRYDIYPEYKANRDETPEDLKPQFGLIREATKAFGIPALEMEGFE
ADDLIATYTRMAREQGKTVTIVSSDKDLMQLLTDGVRIFDPMKAKFMGPEDAFEKFGVTP
DKVVDVQSLAGDPSDNVPGVPGIGIKTAAQLINEYGSLDELLARAGDIKQPKRREALIEN
AEKARISRRLVQLDDHAPVPVAFEDMRARDLHSPTLVAFLAEQGFKSVISRLGLKHDAPS
SPDSIPAKAGIQTGPSMDSRLRGNATKGDTPISENVYTLINDIKTLQDWADQARAAGMVA
VDTETTNLTPAMADLVGISMAITPGQAAYIPVGHKGQVDLLGGGDTTIPQLPLKDVIAVL
KPLLEDESVLKIGHNIKYDLQMFAGIGINVTPVDDTMLLSYVLDGTEHGHGMDELSTLML
GHETIKYNDVAGTGKNQVTFDRVDIAKALDYAAEDADVTLRLHRILKPRLAQEKMVSVYE
DIERAIVPVIAEMERTGIKVDTTVLKQMSHEFGMKLATLESAIHKLAGHEFNVASPKQLG
VVLFDEMGLQGGSKTKTGDWSTAADVLEDLAAQGIEIVEKVLEWRQLAKLKSTYTDALQN
DINPKTGRVHTSFSLAGTNTGRLSSSDPNLQNIPIRTDEGRRIREAFIAEDGHVLLSVDY
SQVELRLAAALADVKALKQAFIDKVDIHALTASQVFGVPLDQVTPELRRAAKAVNFGIIY
GISGWGLAKQLGCEPGEANEFIRKYLTRFREIQDYMEAKKDEARKNGFIKTVYGRKCVIN
NINAKNGAWRAFAERQAINAPLQGTAADIMKLAMARMPHALKQAGLSARMLLQVHDELVF
EVPEAEIEQTAALVKHVMESVAHIDVPLSAEAGWGKNWATAH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcaaacgcacaaaacgtaaccgataataacgaaatctttctggtggacggg
tccggatatattttccgcgcctattacgccctgccccagaatttgaccaacccgcacggc
gtgcctgtgggggccgttttgggcttcgtcaatatgatgacgaaattgctggccgatatg
catgcgccgtttatcgccgtcatcttcgatgccgcgcgccagaatttccgctacgacatt
tatccggaatacaaagccaaccgcgatgaaacgccggaggatttaaaaccgcaattcggc
ttgatccgcgaggcgaccaaagcgttcggcattcccgcgttggagatggaggggtttgag
gcggacgatctgatcgccacctatacccgtatggcccgcgaacagggtaaaaccgtcacc
atcgtcagcagtgacaaggatttgatgcagcttctgaccgatggtgtgcgcatcttcgac
ccgatgaaggcgaaattcatgggccccgaagacgcgtttgaaaaattcggcgtcaccccg
gacaaagttgtcgatgtgcaatcactggcgggcgatccgtccgacaacgtgcccggcgtg
cctggcatcggcattaaaaccgccgcgcaattaatcaacgaatatggatcgctggatgaa
ttgctggcccgcgccggtgatatcaaacaacccaagcgccgcgaggccctgatcgagaac
gcagagaaagcccgcatttcacgccgtctggtccaactggacgaccacgccccggttccg
gttgcgtttgaggatatgcgcgcccgcgatctgcacagcccaacattggtcgcgtttctg
gccgaacaggggtttaaatctgtgatttctcgtttgggactgaagcacgatgccccttcc
tcccctgatagcattcccgcgaaagcgggaatccagaccggcccatccatggattcccgc
cttcgcgggaatgccacaaagggtgacacacccatcagcgaaaacgtctacaccctaatc
aacgacattaaaacgttacaagattgggcggatcaggcccgcgcagcgggcatggttgcg
gttgataccgaaaccaccaacctgaccccggcgatggccgatctggtcggcatatccatg
gcgattacgccggggcaggccgcctatatccccgtggggcacaagggacaggtggatttg
ctgggtgggggtgataccaccatcccgcaattgcccctgaaagatgtcatcgcggtgctg
aaaccactgctggaagatgaatctgttctgaaaatcggccacaacattaaatatgatctg
cagatgtttgccggcatcggcatcaacgttacgcccgtcgatgacacgatgctgctgtcc
tacgttctggatggcaccgaacacggccatgggatggatgaactgtccaccctgatgctg
gggcatgaaacgattaaatataacgatgtcgccggaaccggaaaaaatcaggtcacgttc
gaccgcgtggatattgccaaggcactggattacgcggcggaagatgccgatgtcacgctg
cgcctgcaccgcattttgaaaccacgtctggcacaggaaaaaatggtcagcgtgtatgaa
gatatcgaacgcgcgattgtccccgtcattgccgagatggaacgcacggggatcaaggtc
gacaccaccgtattgaaacagatgagccatgaattcggcatgaaactggccacgctggaa
agcgcaatccataaactggccggtcacgaatttaacgtggcgtcgccgaaacaactgggc
gtcgtcctgttcgacgaaatgggcttacagggcggcagcaagaccaaaaccggcgactgg
tccaccgccgccgacgtgttggaggatttagccgcacaagggattgagatcgttgagaag
gttttggaatggcgccagctggccaaactgaaatccacatacaccgacgccttgcagaac
gacatcaacccgaaaacgggccgcgtgcacacgtcgttttcgctggcggggaccaatacg
ggccgcctgtcatcatccgacccaaatctgcaaaacattccgatccgcacggacgaaggc
cgccgcattcgtgaagccttcatcgccgaagatggccacgtgttactgtccgtcgattat
tcccaagtggaattgcggctggccgcggcgctggccgatgtaaaggcattgaaacaggct
tttatcgacaaggtcgacattcacgccctgaccgcatcgcaggtttttggcgtgccgttg
gatcaagtgacgccggaattgcgacgcgcggccaaggccgtcaatttcggcatcatctat
ggcatcagcgggtgggggttggccaagcaattggggtgcgaacccggcgaggccaatgaa
ttcattcgcaaatatttgacccgtttccgtgaaattcaggattacatggaagcgaagaag
gacgaggcccgcaaaaacggatttatcaaaaccgtctatggccgcaaatgcgtgatcaac
aatatcaatgccaagaacggcgcatggcgcgcctttgccgaacgtcaggccattaacgcc
ccattgcagggcaccgccgccgacatcatgaaactggccatggctcgcatgccccatgca
ttgaaacaggccggattatccgcgcgcatgttgttgcaggtgcatgacgaattggtgttc
gaagtaccggaagccgaaatcgaacaaaccgccgctttggtcaagcatgtgatggaatcg
gttgcccatatcgacgtgccattatccgccgaagccggatggggcaaaaattgggccacc
gcccattaa
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