Micavibrio aeruginosavorus ARL-13: MICA_6
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Entry
MICA_6 CDS
T01630
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mai
Micavibrio aeruginosavorus ARL-13
Pathway
mai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICA_6 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mai03021
]
MICA_6 (rho)
03019 Messenger RNA biogenesis [BR:
mai03019
]
MICA_6 (rho)
Transcription machinery [BR:
mai03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MICA_6 (rho)
Messenger RNA biogenesis [BR:
mai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MICA_6 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
AAA_22
S1CSD-TOTE-2
Fungal_virus_P2_C
AAA
Spore_III_AA
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AEP08354
UniProt:
G2KLB8
LinkDB
All DBs
Position
3809..5065
Genome browser
AA seq
418 aa
AA seq
DB search
MNLQELKTRSPAELLAFAEELGLDNCNTMRKQDMMFAILKQLAEEGVPIAGAGVLEVLQD
GFGFLRSPEENYLPGPDDIYVSPSQVRRFGLRTGDIVEGEIRAPKDSERYFALLKVGSIN
GEAPEKIRHRINFDNLTPLYPERKIKLELADPTKKGMSQRVIELVSPLGFGQRALIVAPP
RTGKTVLMQDIAHSIATNHPDAYLIVLLIDERPEEVTDMARSVRGEVISSTFDEPAARHV
QVAEMVMEKAKRLVEHKRDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEQGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIVLDRKISDKRVFPAIDI
QKSGTRKEELLVDKATLSKMWVLRRILNPMGTTDAVEFLIDKMRDTKSNDDFFQAMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaagaactgaaaacacggtccccggccgaattgctcgcgtttgcggaggag
ttgggtctcgataactgcaacaccatgcgcaaacaggacatgatgtttgccattttgaaa
cagctggccgaggaaggggtgcccatcgccggggcgggggttttggaagtgctgcaggac
gggttcgggttcctgcgttccccggaagaaaactatttgccgggcccggacgatatttac
gtttccccctcgcaagtgcgccgttttggcctgcggaccggggatattgttgagggcgaa
attcgcgccccgaaagattccgaacgctacttcgcccttctcaaggtcggctcgatcaac
ggagaagccccggaaaagatccgccaccgcatcaacttcgacaacctgaccccgctgtat
ccggaacgcaaaatcaagctggagctggcggacccgacgaaaaagggcatgtcccagcgt
gtgatcgaactggtcagcccgctgggcttcggccagcgggcgttgatcgtcgctccgccg
cggaccggtaaaaccgttttgatgcaggacatcgcccattccattgccaccaaccacccg
gatgcgtatttgatcgttctgttgatcgacgaacgcccggaagaagtgacggacatggcc
cggagcgtacgcggcgaggttatttcctccaccttcgacgaaccggcggcccgccacgtt
caggtggccgaaatggtcatggaaaaggccaagcgcctggttgaacataaacgtgacgtg
atcattctgctggactccatcacccgcctggcccgggcgtacaacaccgttgtgccatca
tccggtaaagttttgaccggtggtgtggacgccaacgccctgcagcgtccgaaacgcttc
ttcggtgcggcccgtaacattgaacagggcggttcgttgaccattatcgccacggccctg
atcgaaaccgggtcccgtatggacgaggttattttcgaagaattcaaaggcaccggtaac
agcgaaatcgttctggaccgcaagatttccgacaagcgcgtcttcccggccatcgacatt
cagaaatccggtacacggaaagaagaattgctggtcgacaaggcgacattgtccaaaatg
tgggttctgcgccgtatcctcaacccgatgggcaccaccgatgcggtggagttcctgatc
gacaagatgcgcgacacgaaatcaaacgacgatttcttccaggcgatgaaccagtag
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