Micavibrio aeruginosavorus ARL-13: MICA_908
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Entry
MICA_908 CDS
T01630
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mai
Micavibrio aeruginosavorus ARL-13
Pathway
mai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICA_908 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mai03019
]
MICA_908 (recQ)
03400 DNA repair and recombination proteins [BR:
mai03400
]
MICA_908 (recQ)
Enzymes [BR:
mai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MICA_908 (recQ)
Messenger RNA biogenesis [BR:
mai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MICA_908 (recQ)
DNA repair and recombination proteins [BR:
mai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MICA_908 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AEP09241
UniProt:
G2KSF7
LinkDB
All DBs
Position
complement(904389..906158)
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AA seq
589 aa
AA seq
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MFGYDSFRGHQQAVIEHVMAGGSCCTLMPTGAGKSLCYQIPALCRPGVGIVVSPLIALMQ
DQVSALRELGIRAAALNSSLSWQEMQDALSAMQNGQLDLVYIAPERLVTDAILNILDHID
IALIAIDEAHCVSQWGHDFRPEYRMLSALRDRYPHVPCIAVTATADAPTRRDIMAQLKLD
EIFVAGFDRPNIRYDVAVKDTPKKQLLTFLQDRPRGESGIIYCLSRRKVDETAEWLLDQG
YTALPYHAGLDARTRANHQNRFLKEEGVIIVATIAFGMGINKPDVRFVAHLDLPANIEAY
YQETGRAGRDGLPATAMMLYGLQDVALRRQMITNSDAPDEQKRVEHHKLTALLGYCEAAH
CRRQILLQYFGDDGAPCGNCDSCLSPQQSIDGTIPAQKILSCIHRTGNMFGGKHIVDVLT
GTPTPQTDKHNHDQLSTWGIGTDIDRRTWESFIRQMVAANLIFVDLEGHGGLKMTTEGMQ
FLKDKATLQLRLPREKESRQSKNREAGNALAELENDADRALFESLKALRLSIAREANLPP
YVIFHDKTLIAMATRRPIYMDSMAQIPGVGQSKLDRYAPAFLDVIRQAG
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgttcggttacgattcatttcgcgggcatcagcaggcagtgattgagcatgtgatggcg
gggggaagttgttgcaccctgatgccgacgggtgcggggaaatcattgtgctatcagatc
ccggctctgtgtcgccctggcgtcggcattgtggtgtcaccgttgattgcgttgatgcag
gatcaggtgagcgcgttgcgcgaactgggcattcgtgcggcggcgctgaattcatcgctg
agctggcaagaaatgcaggatgccctgtcggccatgcagaatgggcagttggatctggtg
tacattgcgccggaacgacttgttacggatgccatcctgaatattctggaccatatcgac
attgcattgattgcaattgatgaggcccattgcgtatcacaatgggggcatgatttccgc
ccggaataccggatgttatccgccctgcgtgaccggtacccgcatgtcccgtgcattgcc
gtgaccgcgaccgccgatgcgccgacgcgccgggatattatggcgcaactgaaactggat
gaaatttttgtcgctgggtttgaccgcccgaacattcgatatgatgtggcggtcaaggac
accccaaaaaagcaattgctgactttcctgcaggatcgcccgcgtggggaaagcgggatt
atttattgcctgtcccgccgcaaggtggatgaaacagcggaatggttgcttgatcagggg
tacacagccctgccctatcatgccgggttggatgcgcgcacgcgtgccaatcaccaaaac
cgattcttgaaagaagaaggcgttattattgttgccaccatcgcgttcggcatgggcatc
aataaacccgacgtccggtttgtggcgcacctcgacctgcccgcgaatattgaggcgtat
taccaggaaacgggccgtgcgggccgcgatggcctgcccgcaacggccatgatgctgtac
ggattgcaggatgtcgcgctgcgccgccagatgatcaccaattccgatgcaccggatgaa
caaaaacgcgttgaacatcataagttgaccgccctgctcggctattgcgaggccgcccat
tgccgccgccagattttgttgcaatattttggcgatgacggcgcaccctgtggcaattgc
gattcctgcctgtcgccacaacaaagcattgatggcaccattccagcacaaaaaatcctg
tcctgtatccaccgcacgggaaacatgtttggtggcaaacacattgttgatgttttgacc
ggcacaccaacaccacaaaccgacaaacacaaccatgaccagctcagcacatggggcatc
ggtaccgatattgaccgccggacatgggaaagctttatccgccagatggtggccgccaat
ctgatcttcgtcgatttggaaggccatggtggattgaagatgacaacggaagggatgcag
ttcctgaaagacaaggcaaccctgcaactgcgcctgccgcgtgagaaggaaagccgccag
agcaaaaatcgtgaagccggaaatgccctggcggaattggaaaacgatgccgaccgggcg
ttgtttgaatcattaaaagccctgcgcctatcgatcgcacgggaggcgaacttgccgccc
tatgtcattttccatgataagacactgatcgcaatggccacacgccggcccatttacatg
gattccatggcgcaaatccccggggtgggtcaatcgaagctggatcgatacgcacccgca
tttctggatgtaatccgccaggctggttaa
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