Micavibrio aeruginosavorus ARL-13: MICA_934
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Entry
MICA_934 CDS
T01630
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mai
Micavibrio aeruginosavorus ARL-13
Pathway
mai00541
Biosynthesis of various nucleotide sugars
mai01100
Metabolic pathways
mai01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MICA_934 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mai01005
]
MICA_934 (rfaD)
Enzymes [BR:
mai01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
MICA_934 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
mai01005
]
Core region
MICA_934 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AEP09266
UniProt:
G2KSI2
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All DBs
Position
927269..928258
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AA seq
329 aa
AA seq
DB search
MIIVTGGAGFIGSNLVAALEDRGITNLVVCDTLGSDDKWRNISKRELRDVVHPDQLMNYL
NAHAGEVQAIFHMGAISATTERDADAITQNNFTATRLLWKWCAAHNVRLIYASSAATYGD
GDAGFVDNDAPEFLAKLRPLNPYGWSKHLFDRRTARIVRDGSEPTPPQWAGLKFFNVYGP
NEYHKGEQMSVVCKLYPQVMAGASARLFKSANPNYGDGGQIRDFIYVDDCVSVMMWLYDN
PGINGLFNVGTGKARSFKDLAEAVFAAADKKPKIQYIDMPQELQAKYQYYTQADMTKLRA
AGYDKPFTDLEEGVRRYVQDFMSKSDQYR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtcacgggcggggccgggtttatcgggtccaatcttgtcgctgcattagaa
gatcgcggaatcaccaatctggtcgtttgcgacacgctgggcagtgatgataaatggcgc
aatatttccaaacgggaattgcgcgacgtcgttcatcccgatcaattgatgaattatctg
aatgcgcacgctggcgaggttcaggccatttttcacatgggtgccatttccgcaacaacg
gaacgggacgccgatgccattactcaaaacaatttcacggccacgcgtctgttgtggaaa
tggtgtgcggcgcataatgtccggctgatttacgcgtcatccgccgcgacctacggtgat
ggcgatgccgggttcgtggataatgacgcgccggagtttctggccaaactgcgtccgctg
aacccctatggctggtcgaagcatttgtttgaccgccgcaccgcgcggattgtgcgcgat
ggcagcgagccgaccccaccgcaatgggccgggctgaaattcttcaacgtctatggcccg
aatgaatatcacaagggcgagcagatgagcgttgtgtgcaagctgtatccgcaggtgatg
gcgggggcgtcggcgcgtttgttcaaatccgccaacccgaattacggcgatggtggtcaa
attcgcgactttatctatgtcgatgattgtgtgtcggtgatgatgtggctgtacgacaat
ccgggcatcaacggcctgttcaacgtcggtacgggcaaggcgcgcagtttcaaggatctg
gccgaagctgtctttgccgccgccgataagaaaccgaaaattcagtatattgatatgcca
caggaattgcaggcgaagtatcaatattacacccaggccgatatgaccaaattgcgtgct
gccgggtacgataaacccttcacagatttagaagagggcgttcgtcgttacgtgcaggac
ttcatgtcaaaatctgaccaatatcgttaa
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