Mycolicibacterium aichiense: MAIC_01320
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Entry
MAIC_01320 CDS
T06903
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
maic
Mycolicibacterium aichiense
Brite
KEGG Orthology (KO) [BR:
maic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maic03019
]
MAIC_01320 (hrpA)
Enzymes [BR:
maic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MAIC_01320 (hrpA)
Messenger RNA biogenesis [BR:
maic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MAIC_01320 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
APHB_HrpA
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND_NTPase5
nSTAND3
NACHT
T2SSE
Cas3-like_C_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BBX05329
UniProt:
A0AAD1MAF1
LinkDB
All DBs
Position
133971..137993
Genome browser
AA seq
1340 aa
AA seq
DB search
MVIAAEPTHTRTPPAVLGAIVAPVSEVSVEQVRQLRARLDGVTFRDAARLGRRLKSLRGE
VSAETLRKISDQIGAAEALVATRQAAVPVITYPDLPVSDRRDEIARAITDHQVVVVAGET
GSGKTTQLPKICLELGRGIRGTIGHTQPRRLAARTVAQRIADEVGTPLGETIGYTVRFTD
QASDRTLVKLMTDGILLAEIQRDRRLLRYDTLILDEAHERSLNIDFLLGYLRELLPRRPD
LKVIVTSATIEPERFSAHFNGAPIVEVSGRTYPVEIRYRPLEVPVPVDDSDDPDDPDHEI
VRTEIRDQTEAIVDAVRELEAEPPGDVLVFLSGEREIRDTSDALSRIVDSNTEVLPLYAR
LPTAEQQRVFQPARTRRRIVLATNVAETSLTVPGVRYVVDPGTARISRYSRRTKVQRLPI
EPISQASAAQRAGRSGRTAPGVCIRLYSEEDFEGRPRYTDPEILRTNLAAVILQMAALQL
GDIESFPFLDPPEQRSIRDGVQLLQELGAFDSSGAITDVGRRLAQLPVDPRLARMIVQAD
TEGCVREVLVLAAALSIPDPRERPAEREEAARQKHARFADEHSDFVSFLNLWKYLRDERK
ARSGSAFRRMCREEFLHYLRIREWQDLTGQLRTIARDIGIRESDDPEPADPARVHAALVA
GLLSHIGLREGDSREYTGARNTRFVLAPGSVLTKRPPRWLVVADLVETSRLYGRIAARVE
PEMVERVAGHLVQRSYSEPHWDAKRGAVMAFERVTLYGLPLVARRRVGYATVDPVVSREL
FIQHALVQGEWQSRHHFVADNARLRTELAELEERARRRDMLVGDDDIYAWFDSRIPPQVV
SARHFDGWWKKQRHRTPDLLTFTRDDLLRVDDEDAERPDNWQAGDLSLPLTYRFEPGAAD
DGVTVHIPVEVLARLGGDEFGWQVPALREELVTALIKSLPKELRRNFVPAPDTARAVLAD
IIGGQDRSDPGIGQVGGEPLLEALQRELHRRTGILVPITAFDLEKLPAHLRVTFAVEGPD
GTEVARGKDLDALQRKLAGSARKAVADAVASDLERHGLRAWPDDLEELPRTVERTVGGHL
VRGYPALVDAGKGVDVKVFATEAERDAAMRAGTRRLLRLAVPSPVKAVEKGLDPRTRLVL
GANPDGSLTALLDDCADAAADVLAAKPVWTRADFAALRNQVAEALPSTTKEVVTRVQKVL
AALQEVHLALPDNPPAAQADAVADIRAQLAGLVTTPFVSSTGAARLADLTRYLTAIVRRL
DRLAQAPQADRERMQRVHAVEDAYAELLQALSPARAAASDVRDIGWQIEELRVSLWAQQL
GTPRPVSEQRIYRAIDAILA
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgctgccgagcctacgcacaccaggacgcccccggcggtgctcggcgctatt
gtggcgccagtgtccgaggtctccgttgagcaggtgcgtcagctgcgcgcacgcctcgac
ggcgtgacatttcgtgatgcggcccgcttgggtcggcggctgaaatcgctgcgcggcgag
gtgtcggcggagaccctgagaaagatctccgaccagatcggggccgccgaggcgttggtc
gccacccgtcaggcggcggttccggtgatcacctacccggatcttccggtcagcgaccgt
cgcgacgagatcgcccgagccatcaccgaccaccaggtggtcgtggtcgcgggtgagaca
gggtcgggcaagaccacccagctgcccaagatctgcctggagctcggccgcgggatccgt
ggaaccatcggccacacccagccgcgccggctggccgcgcgcacggtggctcagcgcatc
gccgacgaggtcggcaccccgctgggggagacgatcggctacaccgtccgtttcaccgac
caggccagcgaccgcactctggtcaaactgatgaccgacggaatcctgctcgccgagatc
cagcgcgaccggcgtctgctgcgctacgacacgctcatcctcgatgaagcgcacgagcgc
agcctcaacatcgacttcctgctgggctaccttcgcgaactcttgccgcgcaggcctgat
ctcaaggtgatcgtgacctcggcgacgatcgagccggaacgattttcggcacacttcaat
ggagctccgatcgtcgaggtgtccggccgcacctatccggtggagatccgctatcgaccc
ctggaagtgccggtcccggttgatgattcggatgatcccgatgatcccgaccacgagatc
gtgcgcaccgagattcgcgatcagaccgaggcgatcgtcgacgccgttcgcgagctggag
gcggagccgcccggcgacgtgttggtgttcctgtccggggagcgggaaatccgggacacc
agtgatgcgttgagccgcattgtcgattcgaacaccgaggtgctgcccctgtacgcgcgg
ctgcccaccgccgagcagcagcgggtgtttcagccggcccggacccgcaggcggatcgtg
ctggccaccaacgtcgccgagacgtcgctgaccgtgccgggtgtccggtatgtcgtcgac
cccggcaccgcgcggatctcccgctacagcaggcgaaccaaggtgcagcggttgccgatc
gaaccgatctcccaggcctctgccgcgcaacgggcgggacggtccggtcgcactgcgcca
ggagtgtgcatccggctgtactccgaagaggacttcgagggccggccgcgttacaccgac
ccggagatcctgcgtaccaacctcgctgcggtgatcttgcagatggcggcgctgcaactc
ggtgacatcgagagctttccgttcctggatccgcccgagcaacgcagcatccgcgacggc
gtgcagctgctccaggagctcggcgcgttcgattccagcggcgccatcaccgatgtgggt
cgccggcttgcgcagttgccggtcgatccgcggctggcgcggatgatcgtgcaggccgac
accgaaggatgcgtgcgcgaggtcctggtgctggccgcggcgttgtcgattcccgacccg
cgcgagcggccggccgagcgcgaagaggcggccaggcagaaacacgcccgattcgctgac
gaacactcggacttcgtgtccttcctgaatctttggaagtatctgcgcgacgagcggaag
gcccggtccggcagtgctttcaggcggatgtgccgcgaggagttcctgcactacctacgg
atccgggagtggcaggacctgaccgggcaattgcgcaccatcgcccgcgacatcggcatc
cgggaatccgacgatcccgagccggccgacccggcgcgtgtccacgctgcccttgtcgcc
ggattgctctcgcatatcggtctgcgggaaggggattcgcgggaatacaccggtgcgcgc
aacacccggttcgtactggccccgggatcggtgttgaccaagcgcccgccgcgctggctc
gtggtggccgacctggtggagaccagccggttgtacgggcgtatcgcggcccgcgtcgaa
cccgagatggtcgagcgggtggccggacacctggtgcagcgcagctacagcgaaccgcac
tgggacgccaaacgcggtgcggtgatggccttcgaacgagtcacgctctacgggcttccg
cttgttgcgcgccgacgggtgggatacgccaccgtcgatccggtcgtgtcccgcgagctg
ttcatccagcatgcgctggtccagggggagtggcagagccgccaccatttcgtcgccgac
aatgcgcggctgcggaccgaactggccgagctggaggagcgcgcccgccgccgcgacatg
ctcgtcggtgatgacgacatctacgcctggttcgacagcaggatcccgccgcaggtcgtc
tcggcacgccatttcgacggctggtggaagaagcaacggcaccgcacccccgatctactg
acgttcacgcgcgacgacctgttgcgggtcgacgacgaggacgccgaacgtccggacaac
tggcaggccggtgacttgtccctacccctgacctaccggttcgagcccggcgccgccgac
gacggggtgactgtgcacatcccggtcgaagtgctggcccgactcggcggtgacgaattc
ggttggcaggtaccggcactgcgcgaggagctggtgaccgcgctgatcaagtcgctcccg
aaagaactgcggcgcaactttgttcccgctcccgacactgcgcgggcggtgttggccgat
atcatcggcgggcaggatcggagcgacccgggaatcggccaggtgggtggcgaacctctg
ctggaggcgctgcagcgtgaattgcaccggcgcaccggaattctcgtgccgatcaccgcg
ttcgacctggagaagctcccggcccatctccgggtgaccttcgccgtcgaggggccggac
ggcaccgaggtggctcgcggcaaggacctcgacgcgctccagcgtaagctcgcaggttcg
gctcgcaaggcggtggccgatgcggtggccagtgacctggaacgacacggtctgcgagcg
tggccggatgacctcgaggagttgccgcgcactgtggaacgcacagtgggaggccacctt
gttcgtggttatccagcgctggtcgacgccggtaaaggcgtcgatgtaaaggttttcgcg
accgaggccgaacgtgacgccgcgatgcgggcgggcaccaggcggctgctgcggttggcg
gtgccgtctccggtgaaggcggtggagaaaggactggacccgcgtacccgactggtgttg
ggtgccaaccccgatgggtctctgaccgcactcctggatgactgtgccgacgccgccgcc
gacgtcttggccgccaaaccggtatggaccagagcggatttcgctgcgctgcgcaaccaa
gtggccgaggcactgccgtcgaccacgaaggaagtcgtgaccagggtgcagaaagtgctg
gccgcgctgcaggaggtgcatctggcccttccggacaatccgcccgccgcacaagctgat
gccgtcgccgacatccgcgcgcagctcgccggattggtcaccacgcccttcgtcagcagt
accggggccgcgcgcctagccgatctgacccgctatctgacggcgatcgttcgccgcctc
gaccggctggcccaggcgccgcaggccgaccgcgagcgcatgcaacgggtgcacgccgtc
gaagatgcctatgccgaactgctccaggcgctctcgcccgcgcgcgcggctgcctccgac
gttcgcgacatcgggtggcagatcgaggaattgcgagtcagcctgtgggcccagcagttg
ggcactccccggccggtcagtgagcaacggatctaccgcgcgatcgatgcgatcctggca
tga
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