Mycolicibacterium aichiense: MAIC_46160
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Entry
MAIC_46160 CDS
T06903
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
maic
Mycolicibacterium aichiense
Pathway
maic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MAIC_46160 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maic03021
]
MAIC_46160 (rpoC)
03400 DNA repair and recombination proteins [BR:
maic03400
]
MAIC_46160 (rpoC)
Enzymes [BR:
maic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MAIC_46160 (rpoC)
Transcription machinery [BR:
maic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MAIC_46160 (rpoC)
DNA repair and recombination proteins [BR:
maic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MAIC_46160 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BBX09813
UniProt:
A0AAD1MDP4
LinkDB
All DBs
Position
complement(4734735..4738691)
Genome browser
AA seq
1318 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRTWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDEEMRHNELSTLEAEMEVEKKAVADQRDSDLEARAQKLEAD
LAELEAEGAKSDVRRKVRDGGEREMRQLRDRAQRELDRLDEIWTTFTKLAVKQLIVDENL
YRELVDRYGEYFQGSMGAESIQKLIETFDIDAEAESLRDTIRNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYFLTTLVAGEKGEYT
AAAKDAPETGVYSSPAEAIMAMDRGALSVRAQIKVRLTQLRPPHEVENELFGENGWRPGN
AWTAETTLGRVLFNELLPQGYPFVNEQMHKKVQARIINDLAERYPMIVVAQTVDKLKDAG
FHWATRSGVTVSMADVIVPPEKQEILERYEAEADGIEKKYQRGALNKQERNDALVELWKE
ATEEVGNALRAHYPNDNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCGTERGILVD
LAERQADGSLIRDPHVETSAYARTLAADAVDEAGNVVVTAGHDLGDPAIDALLEAGITSV
KVRSVLTCTSASGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
TGGADIVGGLPRVQELFEARIPRNRAPIADVAGRVQLEETDKFYKITIVPDDGSEEVVYD
KLSKRQRLKVFKHDDGSERLLVNGDHVEVGQQLLEGSADPHEVLRIEGPRKVQIHLVKEV
QEVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERGEFESENRRVVAEGA
EPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLI
PAGTGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccggatcggtcttgcgaccgcggacgacatc
cgcacctggtccttcggtgaggtcaagaagccggagaccatcaactaccgcacgctcaag
ccagagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgtcgcgagcggatgggccacatcgagctggccgcaccg
gtcacgcacatctggtacttcaagggcgttccgtcgcgcttgggctatctgctggacctg
gcgccgaaggatctcgagaagatcatctacttcgccgcctacgtgatcaccgcggtcgac
gaggagatgcgccacaacgagctctccactctcgaagccgagatggaggtcgagaagaag
gcggtcgccgatcagcgtgactccgacctggaggcccgcgcccagaagctcgaggccgac
ctggccgagctcgaggccgagggtgccaagtccgacgtgcgccgcaaggtgcgcgacggt
ggcgagcgcgagatgcgtcagctgcgcgaccgggcccagcgtgagctggaccggctcgac
gagatctggacgaccttcaccaagctggccgtcaagcagctcatcgtcgacgagaacctg
taccgcgagctggtcgaccgctacggcgagtacttccagggctcgatgggtgcggagtcg
attcagaagctcatcgagaccttcgacatcgacgccgaggccgagagcctgcgcgacacc
atccgtaacggcaaggggcagaagaagcttcgcgccctcaagcgcctgaaggtggtcgcc
gcgttccagcagtcgggcaactcgccgatgggcatggtcctcgacgcggtgccggtgatc
ccgccggagctgcgcccgatggtccagctcgatggtggccgcttcgcgacctccgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggttgaagcgactgatcgacctc
ggcgctcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtcggtggacgcg
ctgttcgacaacggccgtcgtggccggcccgtcaccgggccgggcaaccgtccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgtcagaacctgctcggtaag
cgtgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagctgatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgatctcaaccacgcgcagaacatcaagagcgccaagcggatggtcgagcgtcagcgt
ccccaggtgtgggatgtcctcgaagaggtcatcgccgagcacccggtgctgctcaaccgt
gcacccacgctgcaccgcctcggtatccaggccttcgagccgcagctggtggagggtaag
gccatccagctgcacccgctggtctgtgaggcgttcaacgccgacttcgacggcgaccag
atggcggttcacctgccgctgagcgccgaggcgcaggccgaggcccgcatcctgatgctg
tcgtccaacaacatcctgtcgccggcgtcgggcaagccgttggccatgccgcgtctggac
atggtcacgggtctgtacttcctgaccacgctggttgccggcgaaaagggtgagtacacc
gctgccgccaaggatgcgccggagaccggtgtgtacagctcgccggccgaggcgatcatg
gcgatggaccgtggtgcactgtcggttcgcgctcagatcaaggtgcgcctgacgcagctg
cgtccgccgcatgaggtcgagaacgagctgttcggcgagaacggctggcgcccgggcaat
gcctggaccgccgagaccacgctgggccgggtgctcttcaatgagcttctgccgcagggg
tatccgttcgtcaacgagcagatgcacaagaaggtccaggcccggatcatcaacgatctg
gccgagcgctacccgatgatcgtcgtcgcgcagaccgtcgacaagctcaaggacgccggt
ttccactgggccacccgttcgggtgtcacggtctcgatggccgacgtcatcgtgccgccg
gagaagcaggagatcctcgagcgttacgaggccgaagccgacgggatcgagaagaagtac
cagcgcggcgcgctcaacaagcaggagcgcaacgacgcgcttgtcgagctgtggaaggaa
gccaccgaagaggtcggtaacgcgttgcgggcgcactaccccaacgacaacccgatcatc
acgatcgtggattccggtgcgacgggtaacttcacccagactcggacgctggccggcatg
aagggtctggtgaccaacccgaagggtgagttcatcccgcggccgatcaagtcctcgttc
cgcgagggcctgacggtgctggagtacttcatcaacacccacggcgcccgtaagggtctg
gcggacaccgctcttcgtaccgccgactcgggttacctgacccgtcgtctggtggacgtc
agccaggacgtgatcgtgcgtgagcacgactgcggcaccgagcgcggcatcctggtcgac
ctggccgagcgccaggccgacggcagcctgatccgggatccgcacgtcgagacctcggcg
tacgcccgcacgctggccgcagacgcggtcgacgaagcaggcaacgtcgtcgtcaccgcc
ggacacgatctcggcgacccggcgatcgacgccctgctggaggccggcatcacctcggtc
aaggtccgctcggtgctcacctgcaccagcgcctcgggtgtgtgcgcgatgtgctacggc
cgttcgatggccaccggcaagctggtggacatcggcgaggccgtcggcatcgtggccgcg
cagtccatcggtgagcccggcacgcagctgaccatgcgcaccttccaccagggtggtgtt
accggtggcgccgacatcgtcggtggtctgccccgcgtgcaggagctgttcgaggcgcgt
attccgcggaaccgcgcaccgatcgccgacgtcgcagggcgggtccagctggaggagacc
gacaagttctacaagatcaccatcgttcccgacgacgggagcgaggaggtcgtgtacgac
aagctctccaagcgtcagcggttgaaggtgttcaagcacgacgacggttccgagcgactg
ctggtcaacggtgaccacgtcgaggtgggccagcagctcctcgagggctcggccgacccg
cacgaggtgctgcgtatcgagggcccgcgcaaggtgcagatccacctggtcaaggaagtc
caggaggtctaccgggcgcagggtgtgtcgatccacgacaagcacatcgaggtcatcgtc
cggcagatgctgcggcgcgtcacgatcatcgactcgggcgcaacggagttcctgcccggc
tcgctgaccgagcgcggcgagttcgagtcggagaaccgtcgggttgtcgccgagggcgcc
gagcccgcggccggccgtccggtgctgatgggtatcaccaaggcgtcgctggccaccgat
tcgtggctgtcggcggcgtcgttccaggagaccactcgcgtgctgaccgatgcggcgatc
aactgccgcagcgacaagctgcagggtctgaaggagaacgtgatcatcggcaagctgatc
ccggccggtaccggtatcaaccgctaccgcaacatccaggtgcagccgaccgaggaagcc
cgtgctgcggcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggc
caggccaccggtgccgcggtgccgttggacgattacggttactcggattaccggtag
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integrated database retrieval system
