Metarhizium robertsii: MAA_08584
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Entry
MAA_08584 CDS
T03107
Name
(RefSeq) ATP-dependent RNA helicase DOB1
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
maj
Metarhizium robertsii
Pathway
maj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAA_08584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maj03019
]
MAA_08584
03041 Spliceosome [BR:
maj03041
]
MAA_08584
03009 Ribosome biogenesis [BR:
maj03009
]
MAA_08584
03016 Transfer RNA biogenesis [BR:
maj03016
]
MAA_08584
Enzymes [BR:
maj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MAA_08584
Messenger RNA biogenesis [BR:
maj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
MAA_08584
Spliceosome [BR:
maj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
MAA_08584
Complex C
U4/U6.U5 tri-SnRNP related factors
MAA_08584
Ribosome biogenesis [BR:
maj03009
]
Eukaryotic type
Pre-60S particles
Helicases
MAA_08584
Transfer RNA biogenesis [BR:
maj03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
MAA_08584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
MTR4-like_stalk
DEAD
Helicase_C
DEXQc_Suv3
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
19262870
NCBI-ProteinID:
XP_007824773
UniProt:
E9F8I5
LinkDB
All DBs
AA seq
1098 aa
AA seq
DB search
MDELFDVFDGQAGAQSASDSEREFQTSRARDKSKKRKADEAMNGTAAVETPKEGDDGDMG
DATEVSKAEESEEEDSDTPSQQDKKRRKKEDGTGPVMTDTFQTATSREVAGAATLIPQDS
SLVLSHNIQHQVALPPDLDYEYVPLSEHKSPDEPARTWNFKLDPFQSLSVASIERDESIL
VSAHTSAGKTVVAEYAVAQCLKRNQRVIYTSPIKALSNQKYRDFEAIFGDVGLMTGDVTI
NPTASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIIMLPDKVR
YVFLSATIPNAFQFAEWIAKIHHQACHVVYTDFRPTPLQNYFYPSGGKGARIVVDEKGNF
NEHNFNLVMKEIEDKKGAGSNDINAKQRGKGKNKKINKGGVDEGSDIHKIIRMTIKKKFN
PVIVFNFSKAECENMALNISSLSFNDDSEKAMVRKVFHSAIESLSEQDRELPQIKNLLPL
LERGVGVHHSGLLPILKETIEILFQESLLKVLVATETFSIGLNMPAKTVVFTQVTKWDGV
KRRPITSSEYIQMAGRAGRRGLDARGVVIMMIDDKLEPDTAKGIVTGHQDKLNSAFYLGY
NMILNLLRIEAISPEFMLERCFHQFQNAASVPSLEKELMSLQQERDGLSIPDEATIKDYY
QIRQQLNSYTEDMRAVIQQPTHCIEFLQPGRLVQIYNPKEAHDNVTGGLDFGWGVIVNHY
PRRAPRLGEPEWEPQESHIIDVMLPISASSADITPGQPTGAMPPGLKPAGADTADTATIN
VVIPCLLTCMKAISQIRIFMPKDGLKADADKDQARKSLAEVKRRFTDGIPILDPLENMEI
VDDSFKKLLRKIEVLESRLLANPLHMSPMLPSLWDQYSEKVQLIEKVKEKKKAISKAHSI
AQMDELKSRKRVLRRLGFINESEVVQLKARVACEISSTEGHELLLSELLFDRFFNELTPE
TCAAVLSCFIFDEKVETQALKEDLQKPYREIQAKARIIAKVSQECKLDVNEEEYVTSLKW
QLMETVYAWAQGRPFIEICKMTKTYEGSLIRLFRRLEELLRQMGEAAKVMGNEDLVKKFD
ESLQKIRRDIVAAQSLYL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggatgagttgtttgatgtttttgacggccaggccggagcccagagcgctagcgattcc
gaaagagagtttcaaacgtctcgagcccgcgacaagagcaagaagcgcaaggcggatgag
gccatgaatggcactgcggctgtggaaaccccaaaggaaggcgatgatggtgatatgggc
gacgccaccgaggtatccaaggcggaggagtccgaggaggaggattcagatacccccagc
caacaagacaaaaagagacgaaagaaggaggatggtaccgggcctgttatgacggatacg
tttcaaacagccacgtcaagagaagtcgctggtgcggcaactctgataccgcaggattcg
tccttggttttgtcgcataacattcagcaccaagttgctttgccacccgatctggactac
gaatacgttcccctgtcggagcacaagtcgcctgacgagcctgcgagaacatggaatttc
aagctggaccctttccaaagcttgtcggtggcgtcaattgaacgggatgaaagtattctt
gtgtcggctcacacttctgctggcaaaacagttgttgctgaatacgccgtggcgcaatgt
ttgaagcgcaaccagcgagtcatctacaccagtcccatcaaggcgcttagcaatcaaaaa
tatagagatttcgaggcaatctttggagatgtcggtctgatgactggtgatgttacaatc
aaccccacggcgagctgcttggtcatgactactgaaattctgcgatccatgttataccgt
ggctcagagattatgcgagaagtcgcctgggttgttttcgacgagattcactatatgcga
gacaagactcgaggtgttgtgtgggaggagaccataatcatgcttcccgacaaggtccga
tacgtctttttgtccgccaccatccccaacgcctttcagtttgccgagtggattgccaag
attcatcaccaggcttgccacgtcgtttacacagacttccgacccacgcctctgcagaat
tacttttacccctctggcggcaagggcgcgcgaattgtggtcgatgagaagggcaacttt
aatgagcacaactttaatctcgttatgaaagagattgaggataagaagggtgccggctcc
aatgacatcaacgcgaagcaaaggggcaagggcaagaacaagaagatcaacaagggcggt
gtggacgaaggttccgacatacacaagatcattcgtatgaccatcaagaagaagtttaac
cctgtcattgtgttcaatttcagcaaggcagagtgcgagaatatggccttgaatatttcc
agcctgtcgttcaatgacgattccgaaaaggccatggtgaggaaggtttttcacagcgcc
attgagagtttgtcggagcaagatcgagaactgcctcaaatcaagaacttgcttcctctt
ctggagcgaggcgttggcgtgcatcactcaggtttgctgccgattctaaaggaaaccatt
gagattttgtttcaagagtctcttcttaaagttctcgttgccactgagaccttctccatt
ggattaaacatgcctgccaaaacggtcgtcttcacccaagtcaccaaatgggacggtgtc
aagagacggcctatcacgtcgtccgagtacattcagatggcgggtcgtgctggacgtcgt
ggtctcgatgctcgtggtgtggtcatcatgatgattgacgacaagcttgaaccggatacc
gccaagggtattgtgacgggtcaccaggataagctcaattccgcattttacctaggatac
aacatgattctcaacctgctgcgaattgaggcgatttcacccgaatttatgcttgaaagg
tgcttccatcagttccagaatgccgccagcgtcccctcgttggagaaggaactgatgtcg
ctgcaacaagagcgagacggactctccatacccgacgaggcgacaatcaaggattactac
cagattcgacagcaactcaactcgtatactgaagacatgcgggccgtcatccagcagccc
acccactgcatagagtttcttcagccaggacgcctggtgcagatatacaaccccaaggaa
gctcatgataacgttacaggaggcctcgactttggatggggtgtcatcgtcaatcactat
cctcgacgggcgcccagactcggtgaacccgagtgggaaccgcaggaatcgcacatcatt
gatgttatgctacctatttcggcatcaagtgccgacattactcctggccagccgactgga
gccatgccgcctggcctcaaacctgctggcgcagacaccgcagacactgctacaatcaat
gtggtaataccctgcctacttacgtgcatgaaagccatcagtcagatccgcatcttcatg
cccaaggatggcctgaaggccgatgcggacaaagaccaagcacgcaagtcattggcagag
gttaagcgccggttcaccgacggcatccccattttggacccgctggagaacatggagatt
gtcgacgactcgtttaagaaactgctgcgcaagattgaggtgctcgagtcccgactcctc
gccaaccccttgcacatgtcgcccatgctcccgtccctctgggaccagtacagcgaaaag
gtgcagctcatagagaaagtcaaggagaagaagaaggccatttccaaagctcatagtatc
gcgcaaatggacgaactcaagtcgcgcaagcgtgttctccgcagactaggtttcatcaac
gagtcggaagtggtgcagctcaaggcgcgcgttgcctgcgaaatctcgtccaccgagggc
cacgagctgctgctctcggagctcctgtttgaccgcttcttcaacgaactgacccccgag
acgtgcgccgccgtcctcagctgcttcatctttgacgaaaaggtggagacgcaagctctc
aaggaggacctgcagaagccgtaccgcgagatccaggccaaggcgcgcatcattgccaag
gtcagccaggagtgcaagctcgatgtcaacgaggaggaatacgtgacgagtctcaagtgg
cagttgatggagacggtctacgcctgggctcagggcaggccgtttatcgagatttgcaaa
atgacaaaaacctacgaaggctcgctgattcgtctcttccggcgactggaagaattgctg
cgtcagatgggggaggcagccaaggtcatgggcaatgaggatcttgtgaagaagtttgat
gagagcttgcagaagattaggagggacattgtggctgcgcagagcttgtacctttaa
DBGET
integrated database retrieval system
