Mycoplasmopsis agalactiae 5632: MAGa2180
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Entry
MAGa2180 CDS
T01192
Name
(GenBank) Pseudogene of Exodeoxyribonuclease V alphachain(RecD) (N terminal part)
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mal
Mycoplasmopsis agalactiae 5632
Pathway
mal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MAGa2180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mal03400
]
MAGa2180
Enzymes [BR:
mal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MAGa2180
DNA repair and recombination proteins [BR:
mal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MAGa2180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
Viral_helicase1
PhoH
nSTAND3
AAA_22
NPHP3_N
AAA_28
UvrD-helicase
NACHT
RsgA_GTPase
AAA
SLFN-g3_helicase
ATPase_2
NB-ARC
TsaE
AAA_5
AAA_16
AAA_14
IstB_IS21
AAA_29
AAA_18
ResIII
T2SSE
ABC_tran
Mg_chelatase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CBH40447
LinkDB
All DBs
Position
complement(250511..252064)
Genome browser
AA seq
517 aa
AA seq
DB search
MKSFIGYIKEFTYNTDKDWAVANFYVLDTEKIIKISGNINSLPIEVLYEIQTDENPEEKY
NSEIYSCKSYKLFTASDNQIFFEYLKSDVFNKTIGDDFIKKLESYYQSDNIWQEILSNKE
KFLSMKQVRKPVLNSVFNKLTFSNLKLEFLAKDLDLNVLDKLIELYAGSFDLMQEAIKNS
LYEINFQYKIASLESIDKIFLYFFKNDRNNVARIAHYLHNYCNEILNNKSSSYTYLENIK
RYFDDQEKFFIPVELKKKVINNAIRYAKNKKLLIIKKDRIYTAQTYNDEMTIASFLTNKN
KVKKIRHSKFKQHIKEIQEETRKEPKNDNFKYDESQINALRKFIDNKFVVITGGPGTGKT
TLIKGIVKLFKKVYPNESFKIATPTGRAAARIKESFEESDATTIHKLLQYDPSTGEFRKN
IFNPLDEGLLIIDETSMVDNNLFSIFISSIGNAKRVVFVGDVEQLPSIGIGNAFEDIIKS
KKITTVELKSAHRQGKQSKITDLAYMIRNNNFDITKL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatttataggttatataaaagaatttacttacaatacagataaagactgagct
gttgctaatttttatgttttagataccgagaaaatcattaaaattagtggtaatattaat
agcttgcctattgaagttttatatgaaattcaaacagatgaaaacccagaagaaaaatat
aattctgaaatttatagttgtaagtcatataagttattcacagctagcgacaaccaaata
ttttttgaatatttgaaatcggatgtgtttaataaaactattggtgatgattttattaaa
aaattagagtcatactaccaatcagataatatttgacaagaaatactttctaataaagaa
aagtttctaagcatgaagcaagtacgaaaaccagttttaaatagtgtttttaacaagctt
acttttagtaatctgaaactagaatttcttgctaaagaccttgatttaaatgtacttgat
aaactaatagagctttacgcaggatcatttgatctgatgcaagaagcaattaaaaatagt
ttatatgagattaattttcaatacaaaatagctagcctagaatctatagataaaatattt
ttgtatttttttaaaaatgatagaaataatgttgcacgaatcgcacattatttacataat
tattgtaacgaaattctaaataacaaatctagttcttatacatatttagaaaatataaaa
agatactttgacgatcaagagaagttttttattccagtggagttaaaaaagaaagtcatt
aataatgcaataaggtatgcaaaaaataaaaaacttctcattattaaaaaagatagaatt
tatacagctcaaacatataatgatgaaatgactattgcttcatttttaactaataaaaac
aaagtcaaaaaaattaggcattccaaatttaaacaacatataaaagaaatccaagaagag
accagaaaagaaccaaaaaatgacaactttaaatatgatgaaagtcaaattaacgcacta
agaaagtttatagataataaatttgtagtaattactggtggccctggaactggtaagaca
actttaataaaaggtatagtaaaactatttaaaaaagtttatccaaatgaaagttttaaa
atagcaaccccaacaggaagagcagcagcaagaattaaagaaagttttgaagaatctgat
gctacaactattcataaattactgcaatatgatccttcaactggtgagtttagaaaaaac
atattcaatcctttagatgaaggtttattaattattgatgaaacatcaatggttgacaat
aatttatttagtatctttatttcatctattggaaatgcaaaaagagtcgtttttgttggc
gatgtggagcaattaccaagtattggaattggtaatgcgtttgaagatattattaaatct
aaaaaaataacaactgtcgaattaaaaagtgcacaccgtcaaggaaaacaaagcaaaatt
actgatctagcttatatgatcagaaataataattttgacatcacaaaactttaa
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