Mycoplasmopsis agalactiae 5632: MAGa2780
Help
Entry
MAGa2780 CDS
T01192
Symbol
rpoD
Name
(GenBank) DNA directed RNA polymerase sigma factor(Sigma A)
KO
K03086
RNA polymerase primary sigma factor
Organism
mal
Mycoplasmopsis agalactiae 5632
Brite
KEGG Orthology (KO) [BR:
mal00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MAGa2780 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mal03021
]
MAGa2780 (rpoD)
Transcription machinery [BR:
mal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MAGa2780 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4
WHD_MCM8
Motif
Other DBs
NCBI-ProteinID:
CBH40493
UniProt:
D3VQ99
LinkDB
All DBs
Position
complement(313727..315256)
Genome browser
AA seq
509 aa
AA seq
DB search
MSKKSELKATVKLIKSHLKNLGKSTLTQEEVYEYLDSIKVEVPDDDMDIMLELLLEENIL
ADDFDEGDASFVNSDDIMDEVDAEKSINKLDSSKGYDDGLDSKIQVKSNDTEDLEDDSEY
SKLIGNYSDNSYDSYEDESEDFMVMDDDYHDSSYDEDDEEDEIVYKTDDKDQSATKSKRG
RKPKDKLSLDTLELEDFSAEEIDLSANLSVKKEDLKNKLTETNDIVKWYMRWIGKYGKLL
QPEEEFELATEMDKGGFRGKRARDKLIKRNLRLVINNAKKYKNRGLSFIDLISEGNSGII
KAVQKYNVNKGFKFSTYATWWIRQAITRAVADQSRTVRVPVHMVETINKITKIERELQQE
NGVDPTDEEIAQRYGNDFTAEKVRHIRKINIGPISLDKQIGKENDSSFSDFVKDESVVNP
VDYASHEELVETLNAILKDTLDADEYELICKRYGVGFDNNGEKYKVFSLEELALERNVSK
ERIRQIENKILRKLKSSPERSRYLKVFME
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaagtgaactaaaggcgacagttaaattaatcaagtcacaccttaaaaat
ttaggcaaaagtactttgactcaagaagaagtttatgagtacttagattcaattaaagta
gaagttccagatgatgatatggatattatgttagaacttcttctagaggaaaatattctt
gcagatgattttgatgagggcgatgcttcatttgttaatagtgatgacattatggatgaa
gttgatgctgaaaaatctataaataagcttgattcgtcaaaaggctatgatgatggctta
gatagcaaaatacaagttaagtcaaatgatactgaagatttagaagatgattcagaatat
tcaaaattaattggcaactatagtgataattcatatgattcatatgaagatgagtctgaa
gactttatggttatggatgatgattatcatgattcaagctatgatgaagatgacgaagaa
gacgaaatagtctataaaacagatgataaagatcaaagcgctactaaaagtaaaagagga
agaaagcctaaagataaacttagtttagatactttggaacttgaagatttttcagctgaa
gaaattgatcttagcgctaatttatcagttaagaaagaagatcttaaaaataagcttact
gaaacaaacgacattgttaagtgatacatgcgttgaattggtaagtatggaaaattatta
caacctgaagaagaatttgagctagctactgagatggataaaggtggctttagaggtaaa
agagctagagataagctaattaaaagaaacttacgtttagttattaataatgctaaaaag
tacaaaaacaggggcttaagctttattgacttaatttctgaaggaaattcaggaattatt
aaggctgtacaaaagtacaatgtaaataaaggttttaagttttcaacctatgcaacttga
tgaattcgtcaagcaattactagagcagtagctgatcaatctagaactgttcgtgtacct
gttcacatggtggaaacaattaacaaaataacaaaaattgaacgtgagttgcaacaagaa
aatggtgttgatccaactgatgaagaaattgcacaaagatacggcaatgactttactgct
gaaaaagttagacacattagaaaaattaacatcggccctatttctttagataagcaaata
ggaaaagaaaatgattcatcgtttagtgactttgttaaagatgaaagtgttgtaaaccct
gttgactatgcttcacatgaagagttggtcgaaaccttaaatgcaatactaaaagacacc
cttgatgcagatgaatatgaattaatttgcaaaagatatggtgtcggttttgataataat
ggcgaaaaatataaagtgttttcattagaagaattagctttagaaagaaatgtttctaaa
gaaagaattagacaaattgaaaacaaaattttaagaaaacttaagagcagtcctgaaaga
agcagatacttaaaagtgtttatggaatag
DBGET
integrated database retrieval system
