Metamycoplasma alkalescens: NCTC10135_00018
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Entry
NCTC10135_00018 CDS
T07126
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mala
Metamycoplasma alkalescens
Pathway
mala03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10135_00018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mala03019
]
NCTC10135_00018
Messenger RNA biogenesis [BR:
mala03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC10135_00018
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Motif
Other DBs
NCBI-ProteinID:
SYV89531
UniProt:
A0A3B0PHA4
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All DBs
Position
1:complement(<8943..10037)
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AA seq
365 aa
AA seq
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MMTGDFRFDYTPIGNMTDFSKLKQIGEEGLDVLFSDSTNAMRPNHSPSESDILKDIKKYM
LQAERKIIVTAFASNLTRIKAIIELGAELGKKVIAFGRSMVDNIDMGRRLGYINAPDEIF
IDKKDLSKYNDNELLILTTGSQGEELASLAKMSYSKHPNVTIKSKDIIIFSSTPIPGNKS
KCELLINRLYKLGAIIYENGVDGYLHTSGHAYKDEHLKIFELTKPKYFMPYHGEFRMSVA
HGQTAIQSGVDPKNVIVANLGDVYYLENHKVSLSKEKVYFGPVFIDGNILSKTNSQIMKE
RMELGENGFIHAVLAINKSKNIILGKPRIISRGAFFVKNALHLIEEAKRLIHGAVLYTIK
NEKDW
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgatgactggtgattttagatttgattacaccccaatcggaaacatgactgatttttca
aaactaaagcaaattggtgaagaaggattggacgttttattctcagattcaacaaatgca
atgcgtccaaatcactcaccttctgaaagtgatattttaaaagatattaaaaaatatatg
ctacaagctgaaagaaaaattattgtcacagcgtttgcatcgaatctaacaagaatcaaa
gcaattattgaacttggagcagaacttggaaaaaaagtaattgcttttggtcgctcaatg
gttgataacattgatatgggaagaagactagggtatatcaatgcacctgatgaaatattt
attgataaaaaagatttatcaaaatacaatgacaatgaattattaattctaacaacaggg
tcacagggtgaagagttggcttcacttgcaaaaatgtcatatagcaaacacccaaatgtc
acaattaaatcaaaagatattattattttttcttcaacaccaattcctggaaacaaatca
aaatgtgagttattaattaatcgtctatacaaattaggagcaatcatttatgaaaatggt
gttgatggttacttacatacctcaggtcatgcttataaagatgaacatcttaaaattttt
gaactaactaaacctaaatactttatgccatatcatggtgagtttcgaatgagtgttgca
catggtcaaacagcaatccaatctggagtagacccaaaaaatgttattgttgcaaattta
ggtgatgtttattatttagaaaatcacaaagttagtttatcaaaagaaaaagtttacttt
ggccctgttttcattgatggtaacatcttatcaaaaaccaattcacaaatcatgaaagaa
agaatggaacttggtgaaaatggttttattcatgctgttttagcaattaataaatcaaaa
aatattattctaggaaaaccaagaattatttcacgtggggcattttttgttaaaaatgct
ttgcatcttattgaagaagcaaaacgtttaattcatggtgctgtactctacacaataaaa
aatgaaaaagattga
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