Metamycoplasma alkalescens: NCTC10135_00346
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Entry
NCTC10135_00346 CDS
T07126
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mala
Metamycoplasma alkalescens
Pathway
mala03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mala00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10135_00346 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mala03021
]
NCTC10135_00346 (rpoA)
03400 DNA repair and recombination proteins [BR:
mala03400
]
NCTC10135_00346 (rpoA)
Enzymes [BR:
mala01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10135_00346 (rpoA)
Transcription machinery [BR:
mala03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10135_00346 (rpoA)
DNA repair and recombination proteins [BR:
mala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10135_00346 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
SYV89844
UniProt:
A0A3B0P964
LinkDB
All DBs
Position
1:189502..>190470
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AA seq
323 aa
AA seq
DB search
MEKNQKIIYKELIAEKINDFNTTFIIEPLARGYANTMGTVLRRTLLSSITSIAPFAIKIN
NVEHEFQTIDGLKEDAITLVRNIRNIRFVYNEELFLENNLAKVSFKSNKEGEIYAYDIPL
NSGLEIVNKDQYIATIAKGGSLEFDLFLRQGKGFIDFEENKNVIGQYGPRLESTIKNGQF
LAIDSDFSPIKKCEISFEELNSSSKLIEERLKIKIETDGTLQAKDAIEQAAKIIVAHFQI
IGNINALETLELFEDNKEKKEKDIKASISIDKLNLTIRSLNALKRAKYNTVEEIIKLSDE
DLSNIKNLGKKSIEDIIQKRNEW
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatcaaaaaattatatacaaggaattaatcgcggaaaaaatcaatgatttt
aatacaacattcattattgaaccacttgcgcgtggctatgcaaatacaatggggacagtt
ttaagaagaacactgttatcttcaattacttcaattgccccatttgcaattaaaattaat
aatgtcgaacatgaatttcaaacaattgatggactaaaagaagatgcaattactttagtt
cgaaacataagaaatattcgttttgtttataatgaagaactttttttagaaaacaactta
gctaaagtttcttttaaatcaaacaaagaaggtgaaatttatgcttatgatattccttta
aattcaggattagaaattgttaataaagatcaatatattgcaacaattgccaagggtggt
tcattagaatttgatttatttttaagacaaggcaaaggatttattgattttgaagaaaat
aaaaatgtcattgggcaatatggtccaagattagaatcgacaattaaaaatgggcaattt
ttagcaattgatagtgattttagtcccatcaaaaaatgtgaaatttcttttgaagagcta
aatagttcatcaaaattgattgaagaaagactaaaaatcaaaatcgaaaccgatggcacc
ttgcaagctaaagatgcaattgagcaagctgcaaaaattattgtcgcacattttcaaatc
attggtaatatcaatgcgcttgaaacacttgaattgtttgaagataataaagaaaagaaa
gaaaaagacattaaagcatcaatttcaattgataaattgaatctaacaattcgttcacta
aatgctttaaaaagagcaaaatataacacagttgaagaaattattaaattaagtgatgaa
gatttatcaaacattaaaaacctaggtaaaaaatcaattgaagacattattcaaaaaaga
aatgaatga
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