Metamycoplasma alkalescens: NCTC10135_00598
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Entry
NCTC10135_00598 CDS
T07126
Symbol
rpoD_1
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mala
Metamycoplasma alkalescens
Brite
KEGG Orthology (KO) [BR:
mala00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC10135_00598 (rpoD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mala03021
]
NCTC10135_00598 (rpoD_1)
Transcription machinery [BR:
mala03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10135_00598 (rpoD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
GLYCAM-1
HTH_10
DnaB_bind
HTH_25
HTH_19
ENT
Motif
Other DBs
NCBI-ProteinID:
SYV90088
UniProt:
A0A3B0NZ43
LinkDB
All DBs
Position
1:complement(351668..352186)
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AA seq
172 aa
AA seq
DB search
MVETINKVLKIERELQQELDYPPTDEEIAKKYGGDFTAEKVRYIRKININPISLDKNIGK
EENSSFSDFVKDESVISPTNFTSQQELSVILNEMINSLPDESDRLLIRKRYGVSDVNGEA
YRPHSLDELSKELGISKEKIRQIETKVLRKLKHPQKRKKLKEFFVNESYNLD
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaacaattaataaggttttaaaaattgaaagagaattacagcaagaattggat
tatccaccaacagatgaagaaattgcaaaaaaatatggtggagatttcactgctgaaaaa
gttcgttatataagaaaaattaatataaatccaatttcgctggataaaaatattggaaaa
gaagaaaactcaagtttttctgattttgttaaagatgaaagtgtgattagtccaactaat
ttcacatcacaacaagaattgagtgtgattttaaatgaaatgattaactcattgcctgat
gaatcagatcgtttgttaattcgtaaaagatatggtgtttcagacgtgaatggtgaagct
tatcgtccgcattcgctggatgaactttcaaaagaattgggaatttcaaaagaaaaaatt
cgtcaaattgaaacaaaagttttaagaaaattaaaacacccccaaaaacgtaagaaatta
aaagaattcttcgttaatgaaagttataatttagattaa
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