Monopterus albus (swamp eel): 109952502 Help Entry 109952502         CDS       T05607                                  Symbol col11a2 Name (RefSeq) collagen alpha-2(XI) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism malb  Monopterus albus (swamp eel) Pathway malb04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:malb00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     109952502 (col11a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:malb00536]     109952502 (col11a2) Glycosaminoglycan binding proteins [BR:malb00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109952502 (col11a2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Laminin_G_3 Motif Other DBs NCBI-GeneID:  109952502 NCBI-ProteinID:  XP_020443266 LinkDB All DBs Position Unknown AA seq 1811 aa AA seqDB search MDIGDFPCQKKRRPWRMNLSSFALVTVALAVCQTTVARADPVDVLRALQVPSLPEGVKKV PGFCTSRRSSSPDHAYRIAKKAQISAPTKQLFSGRFPENFSIMALVKAQPGLQAFLLSIY SEQGIQQLGIELGRSPVFLYEDQNGKPAPEDYPLFTGVNLADGKWHRIALSVSKKNVTLL LDCQKKMTRALPRGNNAEIDTNGITVFGARLLDEEVFQGDIQQLLIASNPQAAYDFCEHY SPDCDSPLPKTQAQDPNTYYFDEEQDDHEYRYYYEETTGVPTSSAPPPTIPVNLTTQDVD TEYAKAGHTPTETDYYYEETVPLPEGEVVGQEEVPVQPQVEPVLGGEEVDATKAGGVGEE AFTEEYETGDVGLKEYDYSYRDYNEPLPETGEIEGNMGPALSAVTDEGGAAIRGQKGEKG EPAVMEPGMLIEGPPGPEGPAGFPGPPGSSGPPGSVGDPGERGPPGRPGLPGADGVPGPP GTSLMLPFRFGQSGGDKGPVVSAQEAQAAAILSQARMALKGPPGPMGFTGRSGPVGSPGS PGLKGESGDPGPQGPRGIQGLMGPPGKTGRRGRAGADGARGMPGETGAKGDRGFDGLPGL PGDKGHRGDPGPMGPSGPQGEDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGIPGPPGV RGNDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGPIGPPGEKGPTGKPGLPGXXXX XXXQGHPGKEGPTGTKGNQGPSGPQGSIGYPGPRGIKGAQGIRGLKGHKGEKGEDGFPGI KGDFGVKGDRGEVGVPGPRGEDGPEGPKGRVGAPGEIGPLGLVGEKGKLGVPGLPGYPGR QGPKGSLGFPGFPGSNGEKGTKGVTGKSGPRGQRGPTGPRGQRGPRGSTGKPGPKGTSGS DGPHGPPGERGLPGPQGASGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKMGPPGPPGV VGPQGPSGETGPMGERGHPGPPGPPGEQGLPGPSGKEGAKGDPGPPGGPGKDGPPGLRGF PGERGLPGTPGSGGLKGSEGPAGPPGPAGSPGERGPAGTGGPVGPPGRPGPQGPSGPAGE KGVPGEKGPVGPAGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGEPGQKGAKGTKGEHGP PGPPGPMGPVGQPGPAGADGELGPRGQQGPFGAKGDEGTRGFPGAPGPIGLQGLPGPPGE KGEMGDVGPLGPPGPPGPRGPAGPSGADGPQGPPGGLGNPGSVGEKGEPGEAGLPGIAGE PGKKGPRGERGEKGEAGQPGTSGSAGGRGPPGDDGPKGNPGPVGFPGDPGPPGEVGPRGQ DGAKGERGEDGEQGESGSPGSPGENGPPGPPGKRGPPGTRGPEGREGEKGTKGDPGAVGP PGKTGPVGPQGSPGKPGTEGLRGLPGPVGEQGSPGPAGQKGPPGPIGPPGLLGLRGDPGA KGEKGHPGLLGLIGPPGEQGEKGDRGLPGPQGSYGPKGETGMPGGTGPIGPAGPPGLPGP QGIKGAKGATGGAGPKGEKGVQGPPGLPGPPGEVIQPLPIQRSPKSKRSIDASQLFSELD PDMPASDATGTEFLMGSEGMEEIYGSLNSLRQEIETMRFPMGTQDSPARTCQDLHLSQPD YKDGEYWIDPNQGCSRDSFKVFCNFTKGAETCLFPSKSVSMVKMSSWDKETPGSWYSQFT TGTKFSYVDSNGEPVGVVQLGFLRLLSVQARQNLTYHCHRSVAWADQSAKNSYSRALHLQ AANEEELSYETNPYIKALVDGCSYRKGFDRTVLEINTPQVEHLPLLDIKVSDFGESNQQF GFEVGPVRFQG NT seq 5436 nt NT seq  +upstreamnt  +downstreamnt atggatattggtgattttccctgccagaagaaacgaagaccatggcgcatgaacttgtca tcctttgccttggtaaccgtggcgctcgcggtgtgccaaacgaccgtggctcgggcagac ccagtggacgtgttgcgagctctccaggttccctctctccctgagggtgtgaagaaagtc cccggcttctgcacatcccgtcgctccagcagccccgatcatgcctaccgcatcgccaag aaggcccagatctccgcccccaccaagcagctcttctcaggtcgtttcccagagaacttc tccatcatggctctggtgaaggcacagcctggtcttcaggccttcctcctttccatctac agtgagcagggcatccagcagctgggcattgaactgggacgctcccccgttttcctgtat gaggaccagaacggcaagccagcccctgaggactacccactgttcacaggcgtcaacctg gctgatggcaagtggcatcgcattgctttatctgtttccaagaaaaatgtgacactgctg ttggactgccagaagaagatgacccgcgctctgccccgaggcaacaacgcagagatcgac accaatggcatcactgtgtttggagctcgtctgcttgatgaggaggttttccagggagac attcagcagctgctgatcgcctccaacccccaggctgcctatgacttctgtgaacactac agcccagactgtgactcccctctgcccaagacccaggctcaggaccccaacacatattac tttgatgaggagcaggatgaccatgaataccgctattattatgaggaaacaacaggcgtt cccacctcctctgcaccccctcccacaattcctgtcaacctgaccactcaggatgtagac actgaatatgccaaggctggccacacccctacagagaccgattattactatgaggagacg gtcccactgccagagggtgaggtggttggacaagaagaggtccctgtacagcctcaggtg gagccagtgctcgggggagaggaggtagatgccaccaaggcaggcggtgtgggcgaggag gccttcactgaggagtatgagacaggggacgtgggccttaaggaatatgactattcctac agagactacaatgagccattaccggagaccggagagatcgaaggcaacatgggccctgcc ctgtcggctgtgacagatgagggaggcgccgccatcagaggccagaagggagagaaagga gaaccagctgtcatggagcctggtatgctgattgaagggcctccaggacctgagggaccc gctggttttcctggcccccctggctcttctggacctcctggctctgtcggcgaccctgga gagaggggccctcctggtaggcctggtctgcctggagctgatggagtccctggacctcca ggaacctcactcatgctgcctttccgttttggtcagagtggaggagataagggtcctgtt gtttctgcacaggaagctcaggcagcagccatcttgtctcaagccaggatggctctgaaa ggaccccctggaccaatgggattcactggacgttctggtccagtgggaagtccaggaagt cctggtctgaagggagagtccggagaccccggtcctcagggccccagaggaatccagggt ttgatgggaccaccaggaaaaacaggaagaagagggcgtgctggggctgatggtgccaga ggaatgccaggagagacaggggctaagggtgaccgtggtttcgatggtcttcctggtttg cctggtgacaaaggacacaggggtgatccaggaccaatgggaccatcaggacctcaagga gaggacggagagaggggagatgatggagaagttggacccaggggtctcccaggtgaacca ggacctcgtggtttgcttggacccaaaggtcctcctggaatcccaggacctcctggtgtc cggggaaacgatgggccccacggtcccaaaggaaacttgggtccccaaggagagccagga cctccaggtcagcagggaaccccaggaactcagggaatgccgggacctcagggacctatc gggcccccaggagagaaaggtcccacaggaaaaccaggtctgccaggaannnnnnnnnnn nnnnnnngtcagggccacccaggcaaagaggggcctactggcaccaaaggaaaccagggg cccagcggtccacagggatctatcggctatcccggccctcgtggcatcaagggagcccaa ggaatccgtggactgaagggccacaagggcgagaagggagaagatggtttccctggaatt aaaggagattttggtgtcaagggagacaggggagaggttggagtaccagggcccagagga gaggatggacctgagggtccaaagggtcgcgtcggagcccccggtgagatcggaccactt ggactcgttggagagaagggtaaacttggtgttcctggacttcctggatatcctggaaga caaggacccaagggatctcttggattcccaggattccctggttcaaacggtgagaaggga acaaagggtgttactggaaaatcagggcccagaggacagagaggaccaacgggcccccga gggcagaggggaccgaggggctcaactgggaaaccaggacctaagggaacttcagggagt gacggtcctcacggtcctcctggagagaggggattgcctgggcctcagggagccagcggt ttccccggacccaagggacctcctggaccaccaggaaaggacgggctgcctggacaccct gggcagagaggagaagttggtttccaaggtaaaatgggtccacctgggcctcctggagtt gttggacctcagggtccatcaggagagactggccccatgggtgagcgtggacaccctgga ccccctggtccacctggagagcaaggacttcctggtccctcagggaaggagggtgccaag ggagaccccggacccccaggaggtcccggtaaagacggacctccaggactgagaggcttc cctggagagagagggctgcctggaacccctggaagtggaggactgaagggaagtgaggga cctgccggacctcctggacctgctgggtctcctggtgagaggggaccagctggtactggt ggacctgttgggcctcctggcagaccaggaccacaggggccttctggacctgcaggagag aaaggagttcctggtgagaaaggccctgttggcccggcaggtcgtgatggagtgcagggc cccgtgggtctgcctggccctgccggaccccctggagtagctggagaggacggggacaag ggggaggttggagagccaggacagaagggcgccaagggaacaaaaggagaacatggtcct cctggtccacctgggccgatgggtcctgtcggtcagcctgggcctgctggtgctgatgga gaacttggaccgaggggccagcagggaccttttggagctaaaggtgatgaaggaaccaga ggattcccaggagccccaggacccatcggactgcagggattaccaggaccaccaggtgag aagggagagatgggagatgttgggcctctgggtccaccgggccctccaggaccccgtggc ccagctggacctagcggtgctgatggtcctcaaggtcctcctggaggtctgggtaatcct ggatctgttggagagaagggagagcccggtgaggccggactgcctggaatagcaggagag cctggaaagaagggaccccgtggagagcgtggagagaagggagaggctggacaacctgga acttctgggtctgctggaggacgaggaccacctggagatgatggacccaaaggaaaccca ggccctgttggtttccctggtgatcctggtccccctggtgaggttggacccagaggtcaa gatggcgccaagggcgagagaggagaggacggcgaacaaggagaatctggctcacctgga tctcctggtgagaacggacctcccggccccccagggaagaggggtcctcctggaacaaga ggcccagagggacgggagggagaaaagggaaccaagggagacccaggtgctgttgggccc ccaggaaagactggccccgttggcccccagggttcaccaggaaaaccagggacagaaggt ctcagaggactcccaggaccagtgggtgagcaaggatctccaggacctgctgggcagaaa ggaccacctggacctattggacctcctggtttgcttggtctgcgtggagaccctggtgcc aaaggagagaagggacacccaggtcttcttggtctcattggacccccaggagagcaggga gagaagggagaccgaggtctgcctgggcctcagggatcctatggacccaaaggagagact ggaatgcctggaggcacgggacccatcggccctgctggtcctcctggtctccctggtcct caaggtatcaaaggagctaagggtgcaactggaggggccggtccaaagggagaaaagggt gtacaaggacctccaggacttcctggcccaccaggagaggtcattcagcccctgcccatc cagaggagtcccaagtccaaacgctctatcgacgccagccagctgttctctgagctcgac cccgacatgcctgcgtctgacgccacgggcactgagttcctgatgggcagcgagggcatg gaggagatctacggctctctaaactcacttcgacaggagatcgagaccatgcgtttccct atgggaacccaggacagtcccgcccgcacctgccaggacctgcacctcagccagccagac tataaagacggagagtactggatcgaccccaaccagggctgctccagagactccttcaag gtcttctgtaatttcactaagggagctgagacatgtctgttccccagcaagagcgtcagc atggtgaagatgagctcctgggacaaggagactccaggatcctggtacagtcagttcacc accggcactaagttctcctacgtggactctaatggcgagcccgtgggtgtggtccagctg ggcttcctgcgactcttgagtgtccaggcccggcagaacctcacctaccactgccatcgc tcagtggcctgggccgaccaaagcgccaagaacagctacagcagggcgctgcacctccag gctgccaacgaggaagagctgagctatgagaccaacccgtacatcaaagccttggtcgac ggctgctcttaccgtaagggctttgacaggacagtgctggagatcaacacaccgcaggtg gagcaccttcctctgctggatatcaaggtgtcagactttggggagagcaaccagcagttt ggctttgaagtgggacctgtacgtttccagggctaa

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