KEGG   Monopterus albus (swamp eel): 109952570
Entry
109952570         CDS       T05607                                 
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb03030  DNA replication
malb03410  Base excision repair
malb03420  Nucleotide excision repair
malb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:malb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109952570 (rfc4)
   03410 Base excision repair
    109952570 (rfc4)
   03420 Nucleotide excision repair
    109952570 (rfc4)
   03430 Mismatch repair
    109952570 (rfc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:malb03032]
    109952570 (rfc4)
   03036 Chromosome and associated proteins [BR:malb03036]
    109952570 (rfc4)
   03400 DNA repair and recombination proteins [BR:malb03400]
    109952570 (rfc4)
DNA replication proteins [BR:malb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109952570 (rfc4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    109952570 (rfc4)
Chromosome and associated proteins [BR:malb03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109952570 (rfc4)
DNA repair and recombination proteins [BR:malb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109952570 (rfc4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    109952570 (rfc4)
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_assoc_2 AAA_16 AAA_22 AAA_30 AAA_11 Mg_chelatase SLFN-g3_helicase AAA_24 DUF815 Gp44_lid AAA_19 AAA_14 RuvB_N AAA_28 AAA_5 ResIII DNAX_ATPase_lid Cdc6_lid AAA_7 Kinesin DUF2760 AAA_3
Other DBs
NCBI-GeneID: 109952570
NCBI-ProteinID: XP_020443375
LinkDB
Position
Unknown
AA seq 358 aa
MQAFLKGATVQPTRPQKDKTAAGPSTEKKAKALPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKN
FAQLTVAGTRPDGKTCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLDICDKENLKYSKESIAALVRVSEGDLRKAITFL
QSAARLNVDKEITESAVIEIAGVVPPKMIDSLLQICFRGTFEKLEVAVRNMVDEGYAATQ
ILSQLHESIIEWDLNDKQKSAITEKMAVVSKCLSDGADEYLQMLSLCSVIMQQASQNN
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgcaggcttttttgaaaggagcgactgtccagcctaccagacctcagaaagacaagaca
gcagcaggacccagtacagagaagaaagccaaggccctaccttgggtagaaaaatacagg
ccaaagtgtgttgatgaggtggcctttcaggaggaggtagtagcagtgctgaagaagtca
ctagaaggagctgatcttccgaacttgcttttctacggccctcctggaacaggaaagacc
tccaccatcctagctgctgccagagaactgtatgggccagagctctacagacagagggtg
ctggagctcaacgcctcagatgaacggggtatccaggttatccgagagaaagtgaagaac
tttgctcagctcaccgtggctgggactcgcccagatgggaagacgtgtcctccttttaag
atcatcatcctggatgaggcggactccatgacagcaccagcacaggctgcactcagacgc
accatggagaaggagtcccgcaccacccgattctgcctcatctgtaattacatcagcagg
attattgagcctctgacatccagatgttcgaagtttcgcttcaagcctttagccaatcag
atccaagaggagcgcctgctggatatctgtgacaaggagaacctcaagtacagcaaagag
agtatagcagctttggtgagggtgtctgagggagacctgcggaaagccatcacctttctc
cagagcgccgcacgccttaacgtggacaaggaaatcacagagagtgctgtcattgaaata
gctggggttgtccctcccaagatgattgacagcttgctgcagatctgcttcagaggaaca
tttgagaaactggaggttgcagtcaggaacatggtggatgagggctacgcagccacacag
atcctgagtcagctccatgagtctatcatagagtgggaccttaacgacaagcagaagtca
gccatcacagagaagatggcggttgtgagcaagtgcttgtcagatggggcagatgagtac
ttgcagatgctgagtctctgttcagtcatcatgcagcaagcctcccagaacaactga

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