KEGG   Monopterus albus (swamp eel): 109953045
Entry
109953045         CDS       T05607                                 
Symbol
parp4
Name
(RefSeq) poly [ADP-ribose] polymerase 4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb03410  Base excision repair
malb04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:malb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109953045 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    109953045 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:malb03400]
    109953045 (parp4)
DNA repair and recombination proteins [BR:malb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     109953045 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 BRCT_2 VIT_2 WGR-like_PARP4 VWA BRCT VWA_2 TniB MutS_I
Other DBs
NCBI-GeneID: 109953045
NCBI-ProteinID: XP_020444062
LinkDB
Position
Unknown
AA seq 1802 aa
MAVFENCSVLLELKNLPVKDKEKLKSAIRENGGNISFVVNKQCSLIVTSDVSTLSSNRLR
SIQKHHTPVVCVEYVYNCVSRGALLPVDEYKLDTSSALSPPLILFSPKQEPPSTTVAEPP
KGQAKPVEFVSVTQKAETPERGRNVLGKFRVYTETDPDLPMYPDNFQVAKYSVFEKTNSN
TWYVLELQSVGVKNERQYRVVRYWKDAIGTKKAAVRDMLVFLSTSEEALAVYQALRKSLQ
AAGLHLRSNIHPQAQDLGSAPLQQLLLEEKLNTGSLSQEVGVFVELLWTEALGCLGNILR
VSVNKLSLNDVSRAEGLLLQAQRKLNEANHAEVIPLLVEVYTLLPHWAPEFVPNAKLISQ
KLDLCQLIRDVLNVSEMTLRSPAPSCVGKFRALRCSIDTIPPRSSEFQAVTALLQDSKVK
ILQVLRVSRGLELQTFKSDLGNIKTLLHSSRPSNFVGILSRGLLLPRVGVEHHGIERTDA
GNLGSGIYFSDVISTSLKYSKPSATDGSRLLLVCDVALGQCKDVRKTDLTLTQAPEGYHS
VHGVRYTRHIYSEFEDDEYVVYSPDQVKLKYVIWFSVEGDALTDFGPAVNTSAELCPPSS
DQELCSEDDGIEMIKNPLEDITAGLLDGSGQQLPLQAVHVKCKLMDLLSQVIIFQKYTNM
SSVPIEAKYVFPLDDSAAVCGFEAFINGKHVVGQVKEKERARKEYKQAIEKGHGAYLMDQ
DAPDVFTISVGNLPPGATVLIKVTFVSELIIRDGGILFTLPGSVAPWQKSAALNQTTQVT
VEKVCLTDEAASTREFTLDMSIEMPYEISSLQCITHKIKMKRTDCKAVVSVLPGEVMGPD
GFQLSVTLSEVHLPRMWVEEHPDKDSQACMLVFFPDFDISSSSASNEVVLLLDTSESMKG
ESLHMAQRIALQILKVLGSDLRVNVILFGTDHQEAFLTAQPLAEARQAAESFIKVFTPVG
GSTELWRPLRALSLLPPSHGIRNLLLLSDGHIQSTELSLQLLRENAQHSRLFTCGLSSTA
NRHMLRALAQAGGGAYEFFDTKTKHNWAEKVARQVKRMTSPGCSSVSVKWQQFSPTAPTP
VQAPKQLHALFNDCHTLVYGFVPHCTQATLLGNLSGQELKTMVSTSELQKTRGTFLHKLT
ARALIRDYEDGSLDSDEAEHEGKKAELKSFIIGLSREFSILSQFTSFVAIEERDPEQTED
GFTDIPKLIAEEDVDILTYISWISPEHSEEEDKELSDVLCDTCYSLPDLAEELPIDGASF
SDYLMLERSRKRTHELESGTESNEAMGVSFVEDELALSDIDLMEGLDTSCPPLSGNAALS
LSPAPHILRTFHALAHSGSAPCPAPPLSGTPIALPRLAPALPGPSPYLKTMLIPSLPCPA
PPPPCSAPPLPCSAPPPPRRASRLLCQAPLPPGSAPPPPPCPAPPPALLGNIRDMEPRLK
RSAGHRRAFRQRHGEFSSPDITMYSGSHPSFFAQELATGALMTSSLAPDLLDTEKSSAVS
VELCTAAVPIHLAKEASLAPVMAADTTGIKVFSYEGAISNFAFDQDSDYIASYESSVQFL
GTSDHTEPNLVEKAQLLSHSVEKIQPPRSCFGFGLAQREPEHVGDARPSVLRRKRLSLIC
PQTSGVLDALDVEMTPADPETLTHKWTKIFQMQHSEGYWELTTELGESINVDVDLFANVY
LQNKGIRSLGVRAHADILRLLATLLVLQLMRVERLEEGKLLHTLFRLDDSSQPRSEHWEE
VKRAVDWVCWADRQYPCAYSRLEFGWSWEASTRQLLGYEDLPPFSPLRGLNLQLTTAPLL
VH
NT seq 5409 nt   +upstreamnt  +downstreamnt
atggccgtgtttgagaactgctctgtgcttttagagctgaaaaatctacccgtcaaagat
aaggagaagctaaagtcagcaataagagagaacggaggcaacatttcctttgtggtcaat
aagcagtgctctctgatagtgaccagtgatgtgtccaccttgagctccaacagactgcgt
agcatccaaaagcaccacacccccgtcgtgtgcgtggagtatgtctacaactgtgtgagc
agaggagctctcctgcctgtggatgaatacaaactggatacctcctccgctctttcacct
cctcttattctcttctcaccaaagcaagaaccaccaagcacaacagttgctgagccaccc
aaaggccaagccaaacctgtggagtttgtcagtgtgactcagaaggcagagacaccggag
aggggcagaaatgtcctgggaaagttcagagtttatactgagaccgatcctgatctccca
atgtatccggataattttcaagtggcaaagtattcggtctttgaaaagacaaacagcaac
acttggtacgtgctggagctgcagagtgtcggagtaaaaaatgaacggcagtaccgtgta
gtcaggtactggaaggatgccataggcactaagaaggcagcagtgagggatatgctggtg
tttctctccacctcagaggaagctctggcagtgtaccaggccctgagaaagagcctgcag
gctgctggtctgcatctgaggagcaacatccatccacaggcccaggaccttggctctgcc
cctctgcagcagctgttgctggaggagaagctgaacactggaagcttatcgcaggaggtg
ggcgtatttgtggagctgctgtggactgaggccctgggctgccttggcaacatcctcaga
gtttcagtcaacaagctcagcctcaatgatgtgagcagggcagagggcctgttgcttcag
gcccagaggaaactaaatgaggcaaaccatgccgaggtgatacctctcctggtagaagtt
tacaccctgctgccgcactgggcacccgaatttgttcctaatgccaagctcatctctcag
aaactggacctctgtcagttaattagagacgttctgaacgtgagtgagatgactctgagg
agccccgcaccttcctgtgtggggaagttccgtgctctgaggtgcagcatcgacacaatt
cccccccgcagttcggagtttcaggctgtgaccgccctgctgcaggacagcaaggtaaag
atcctacaggtcctgcgtgtcagcagaggattggagctgcagacgtttaagagtgatctg
gggaacattaagaccctcctccattcatccaggcccagcaactttgtaggaatcctgtct
cgcggtctgctgttaccccgtgttggagtggaacatcatgggatagagagaacagatgct
ggtaatctgggcagtggaatctacttcagtgatgtcattagcaccagtttgaaatactcc
aagcccagtgcgacagacggctctcggctgctgttggtgtgtgatgtggcgctgggacaa
tgcaaggacgtccgtaagacggacctcacactgacacaggctcctgagggataccacagc
gtgcacggggtccgctacactcgtcacatttactcagaatttgaggatgatgagtacgtg
gtgtacagtcctgatcaggtgaagctaaagtatgtgatttggttcagcgtcgagggagat
gcactgacggacttcggtcctgccgtcaacacctccgctgagctgtgtcccccctcgtct
gaccaagagctctgttcggaggatgacgggattgaaatgattaaaaacccgctggaggac
ataacagctggactgttggatgggtctggtcagcagcttcctctgcaggccgtccatgtg
aagtgcaaactgatggatctgctctctcaggtcatcattttccaaaaatacaccaacatg
agctctgtgcccattgaggcaaagtatgtcttcccattggatgattctgcagcagtgtgt
ggatttgaagctttcattaatgggaaacatgtggtgggacaggtgaaagagaaggagcgg
gctcgcaaggagtacaagcaggctattgagaaaggccatggagcctacctcatggatcag
gatgcccccgacgtgttcaccatcagtgtgggcaatctgccgccgggcgcgactgttctc
attaaagttacctttgtgtctgagctgatcatcagagatgggggcatcctcttcacgctg
cctgggagtgtggctccgtggcagaagagtgcagcactcaaccagaccacacaggtcact
gtggagaaggtgtgtttgactgatgaggcagcaagtacaagggagttcaccctcgacatg
tcaattgaaatgccctatgaaatcagcagcctgcagtgcattactcacaaaatcaaaatg
aagagaacagactgtaaggcagtggtgagtgtgctgccaggagaggtcatgggcccagac
ggtttccagctgtcagttactctgtctgaggttcacctgcccaggatgtgggtggaggag
caccccgacaaggacagccaggcctgcatgttggttttctttccggactttgacatcagc
tctagttcagcatccaatgaagttgtgctgttgctggacacgtctgagtccatgaaggga
gagtctctccacatggcacagagaatcgccctgcagatcctcaaagtcctcggctctgac
ctcagagtcaatgtcattttgtttggcacagatcaccaagaagcttttctcacagcacag
ccacttgctgaagctcgacaggcagcagagagttttatcaaggtcttcactccagtaggg
ggcagcactgagctgtggcggcccctgcgagctctcagcctgctccctccgtcccacggc
atcaggaacctgctgctgctgtcagacggtcacatccagagcacagagctctccctgcag
ctgctcagagaaaacgcccagcacagccgcctcttcacctgcggcctcagttcgacagcc
aatcggcacatgctgagagccctggcccaggcaggaggaggagcctatgaattctttgac
acaaaaaccaagcacaactgggcagagaaggtggcacgtcaggtgaagcgtatgacgtct
cctggttgcagttccgtttcagtgaagtggcagcagttcagcccaacagcacctactcct
gtacaagcccccaagcaactccatgctctgttcaatgactgccacaccctggtctatggc
tttgtgccacactgcactcaggccaccctccttggaaacctaagtggtcaggagcttaaa
acgatggtgtcgaccagcgagctgcagaagaccaggggcacatttcttcacaagctcaca
gcaagggccctcatcagggattatgaagacggaagcctggatagtgatgaagctgaacat
gaggggaagaaagcggagctgaaatccttcatcattgggttgagcagagagttctccatc
ctgtctcagttcaccagctttgtggccattgaggaaagggacccagaacaaacagaggat
ggtttcacagacatccccaagttgattgcagaggaagatgtggacatcctcacatacatc
agctggatttctcctgagcatagtgaagaggaggacaaagaactgtcagatgtactatgt
gatacttgctactccttacctgatttggctgaggaattaccaatagacggtgcttcattt
tcggattacctaatgttggaaaggagcagaaaaaggacgcatgaattggaatcaggcaca
gaatcaaatgaagcgatgggtgttagttttgttgaagatgaacttgccttatctgatata
gacctcatggaaggtcttgatacctcttgcccccctctttctggcaatgctgcactctct
ttatctcctgctccccacattcttcgtacgttccatgctcttgctcactctggttctgct
ccttgtccagcaccccctctttctggcacacctattgctcttcctcgcctagctcctgct
cttcctggaccatctccttatcttaaaactatgttgattccatccctaccttgcccagct
cctcctcctccttgctctgctcctccccttccctgctctgcccctccccctcctagacgt
gcttctcgtcttctgtgccaagctcctcttcctcctggctctgctcctcctcctcctcct
tgcccagctcctcctcctgccctcttaggcaacattcgtgacatggagcctcgattgaag
cggtcagcaggacacaggagagccttcaggcaacgtcatggtgaattctcctcacctgac
attaccatgtactcaggcagtcatccctctttctttgctcaagaattagccacgggtgct
ttaatgacgtcttcattagctcctgaccttctggacacagagaagagttccgctgtctct
gtggaattgtgtacagcagctgtgcctatacatcttgcaaaggaagcatctttagcccca
gtaatggcagctgatacaactggaatcaaagtcttctcatatgaaggggcaatatccaat
tttgcttttgaccaggactcagattatatcgcttcctatgaatctagtgtgcaatttctg
gggacatcagaccacactgagcctaatcttgtagaaaaagcgcaattgttaagccattct
gtagagaaaattcaaccaccacgttcttgttttggattcggactggcccagagggaacct
gaacatgttggagatgcacgtccatctgttttaaggaggaagaggttatccctaatatgt
cctcagacttcaggtgtgctggacgcactggatgtggagatgacaccagctgatccggaa
acactaacgcacaaatggacaaagatcttccagatgcagcattcagagggctactgggag
ttaaccacagagctgggtgaatccataaatgttgacgtagatctctttgccaacgtgtac
ctgcaaaacaagggcatccgttctctaggtgtgagggcccatgcggatatcctgaggtta
ctggcgactctcctggttctgcagctgatgagggtggagaggctggaggaaggcaaactg
ctgcacaccctcttccgcctggacgactcctctcagcctaggtctgagcactgggaggag
gtgaagagggcggtggactgggtttgctgggctgaccggcagtacccatgtgcctacagc
cggctggagtttggttggagctgggaggcatccacccgtcagctgttgggctacgaagac
ctgcctcccttctcacctctcaggggattgaacctgcagctgaccacagcccctctactt
gtccactga

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