Monopterus albus (swamp eel): 109953260
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Entry
109953260 CDS
T05607
Symbol
fdft1
Name
(RefSeq) LOW QUALITY PROTEIN: squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb00100
Steroid biosynthesis
malb01100
Metabolic pathways
Module
malb_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
109953260 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
malb01006
]
109953260 (fdft1)
Enzymes [BR:
malb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
109953260 (fdft1)
Prenyltransferases [BR:
malb01006
]
Terpene biosynthesis
Squalene/phytoene synthase
109953260 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
HAUS4
TM1266-like
Motif
Other DBs
NCBI-GeneID:
109953260
NCBI-ProteinID:
XP_020444346
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MDILKSLAHPEELFNLFKFKMGGCRAVMPKLDYESMSESLRTCYMYLNQTSRSFAAVIQA
LDGELRHAVCIFYLVLRALDTVEDDMSIPLDRKVPMLNDFHTYLYQDEWCFTESQEKDRQ
VLEDFPTISVEFRNLAQEYRDVISDICQRMGVGMAEFLEKKVGSMKEWDQYCHYVAGLVG
IGLSQLFSASRLEDPEVGRDAELANSMGLFLQKTNIIRDYLEDMKEGRVFWPQEAWSQFA
GCLEDLAQPEKLESALSCLNLLVTDALRHVPDVIAYLSHLHNQSVFNFCAIPQMMAIATL
SRCYNNPMVFQGVVKIRKGQTVTLMMDATNMRAVQTIITQYSQEILHKVSLTDPSRDKTL
HILALIQEKSDLSQSTGPRLSRVYLSAAMLLAALSWQYLSATAEQIQGTSDVPGQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctgaagtcactggcccatcccgaggaactattcaacctgtttaagtttaag
atggggggatgcagagccgtgatgccaaagttggattatgagtccatgagtgagagtctg
cggacctgctacatgtacttgaaccaaaccagtcggagttttgcagctgtgatccaagcg
ttggatggggagttgagacatgcagtttgtattttctatcttgtgctgcgagcgctggat
acagtggaggatgacatgagtatccccctggacaggaaggtgccaatgctgaatgatttc
cacacttatctgtaccaggacgagtggtgcttcactgagagccaggagaaagaccggcag
gttctggaggacttcccaacgatatcagtagagttcagaaacctggctcaggaatacaga
gatgtcatctcagatatctgccagcgtatgggagtaggaatggctgaattcctggagaag
aaagtggggtccatgaaagagtgggaccagtattgccactatgtggcagggctggttggt
attggcctgtctcagctcttctcagcatcccggctggaggaccctgaggttggacgggac
gctgagctggcaaactccatgggcctgttcctccagaagaccaacatcatccgggactat
ctcgaagatatgaaagagggacgtgtcttctggccacaagaggcatggagccagtttgca
ggctgtcttgaggacttggcccagcctgagaagctggagtcggctctgtcctgtctcaac
ttgctggtcactgatgctctgcgtcacgtcccagatgttatcgcctacctgtcccacctg
cacaatcagagtgtcttcaacttctgtgccattccacagatgatggcaatagctacacta
tctagatgctacaacaaccccatggtgttccagggagtagtgaagatcagaaaaggacag
actgtcactctcatgatggatgccaccaacatgagagctgtgcagaccatcatcacccag
tacagccaggagattttacacaaggtctccctcactgacccgtcacgggacaagaccctg
cacatcttggctctaatccaggagaagtctgatttgtcacagtccacaggcccccgcctg
tcacgcgtgtacctgtctgctgccatgctgctcgccgctctcagctggcagtacctgagc
gctaccgcagaacagatacagggcaccagtgatgtgccgggacagtga
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