Monopterus albus (swamp eel): 109954660
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Entry
109954660 CDS
T05607
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6 isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109954660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109954660
03036 Chromosome and associated proteins [BR:
malb03036
]
109954660
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109954660
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109954660
mRNA degradation factors
5'-3' decay
Decapping complex
109954660
Chromosome and associated proteins [BR:
malb03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109954660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
CMS1
Motif
Other DBs
NCBI-GeneID:
109954660
NCBI-ProteinID:
XP_020445800
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MGETLPYPAIVMVPTRELALQVSQMSIQLGKHLGGLKIMATTGGTNLRDDIMRLDETVHL
VIATPGRILDLIKKGVAEVDKIQMMVMDEADKLLSQDFVVLIENIISFLPKDHQILLYSA
ALPINVHKFMRNHLQKPYEINLMEELTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSI
IFCNSTQRVALLARKITQLGSSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGI
DIQAVNVVFNFDFPKSAETYLHRIGRSGRFGHLGLAVNLITSDDRYNLKTIEEQLATDIK
PIPSSIDKSLYVAEFHSIDGDCDEGAKNKDMGPSGNKWSVL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaccctcccctatccagccatagtcatggtaccaacaagagagttggccctg
caggtgagccagatgagcattcaactaggtaagcatctaggagggctcaagatcatggct
actacaggtggcaccaacctcagggatgacatcatgcgtcttgatgagacagtgcattta
gtgattgctacaccaggcaggatactagacctgatcaagaagggtgtagcagaagtggat
aagatccaaatgatggtgatggatgaggcagataagctgctgtctcaggactttgtggtg
ctgattgaaaatattattagttttttgccaaaggatcatcagatcctgctttactctgcc
gccttacccatcaatgtccataaatttatgcgcaatcacctacagaagccttatgagatc
aacctgatggaagaactgaccttaaagggtatcacccaatactatgcatatgtgactgaa
agacagaaggtccactgtctgaacacgctcttttctaggcttcagatcaatcagtctatt
atcttctgtaactccacccagagggttgcgcttctagccaggaagatcacccagctgggc
tcatcatgcttttacattcatgcaaagatgatgcaggagtacaggaaccgcgtgttccat
gactttaggaatggattgtgcagaaacctggtctgcacagacctgttcacccggggaatt
gacatccaggcagtaaatgtggtcttcaattttgactttcctaaaagtgcagagacctat
ctacaccgcattggccgatcaggacgtttcggtcacctgggtctggccgttaatctgata
acttcagatgaccgctacaacctgaagactattgaggaacagctggctactgatattaag
cccatccccagcagcattgataagagcctgtacgtggcagagtttcactccattgatggc
gactgcgacgagggagccaaaaacaaggacatgggaccatcaggaaacaaatggtcagtt
ctttga
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integrated database retrieval system
