Monopterus albus (swamp eel): 109954801
Help
Entry
109954801 CDS
T05607
Symbol
clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109954801 (clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109954801 (clp1)
Enzymes [BR:
malb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
109954801 (clp1)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
109954801 (clp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
MMR_HSR1
TniB
AAA_16
AAA_22
AAA_18
Motif
Other DBs
NCBI-GeneID:
109954801
NCBI-ProteinID:
XP_020446054
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MAAEGVEKVSDDAPAAGKVSTRYDLEKETELRFEVEAGEAAEQVELELIVGMAEVFGSEL
NRNRKYTFGPGSKIAVFTWQGCSVNLYGKPEVAYVSKDTPMLLYLNTHAALEQMRKQAER
DNERGPRVMVVGPTDVGKSTVCRLLLSYAVRVGRRPTLVELDVGQSGVSVPGTVSALCIE
RPADVEEGFSVQAPLVYHFGSTTPGTNIKLYNKLTSCLAEVFSQRCEVNRKASVGGCIIN
TCGWVKGSGYQALVHCASAFQVDVVLVLDHERLYNELKRDLPHFVRVVLLPKSGGVVERS
KECRRETRDEKIREYFYGFRGVSFYPFSFEVRFSDVRIYKIGAPSIPDSCLPLGMSQDDT
QLKLVPVTPGRDLTYHVLSVSSVEDGDEGARKSIVESPVCGFIVVTYVDTQAQVMKVLSP
APRPLPRHTLLIMDIRFMDMK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagggtgtggaaaaggtgagtgatgatgctccagcagctgggaaggtcagc
accaggtatgacctggagaaggagactgaacttcgttttgaagtggaggccggggaggca
gcggagcaagtagaactggagctcattgtgggaatggctgaggtgtttggctcagaactg
aaccgcaacaggaagtacacatttggaccaggctccaagattgccgttttcacctggcaa
ggctgcagtgtgaatctttatgggaagccagaggtagcttatgtgtccaaggatactccc
atgctgctctacctgaacacacatgctgcccttgaacagatgagaaaacaagcagagcga
gacaatgaaagggggccaagggtgatggtggttggacctacagatgtggggaagtcgaca
gtatgtcggctgctgctgagctatgctgtaagggtgggcaggaggccaacactggtggaa
ctggatgttggacagagtggggtgtctgtacctgggacagtgtcagcactgtgcatcgag
cgtccagcagatgtggaggaagggttttcagtccaagctcctttggtctaccactttggc
tctactactccagggaccaacatcaaactttacaacaagctgacgtcatgcctggctgaa
gtgttttcccagcgctgtgaagtgaacaggaaggccagcgtgggaggctgcatcatcaac
acttgtggctgggtgaaaggctccggataccaggctctggtccattgtgcctctgccttt
caggtggatgtggtgctggtgctggaccatgaaaggctctacaatgaactcaaacgagac
cttcctcactttgtgcgtgttgtgctcctccccaaatctggtggggtggtggagcgctct
aaggagtgccggcgtgagactcgagatgagaagatccgtgagtatttttatggcttccgt
ggagtgtcattctaccctttttcttttgaagtgcgtttctcagacgtccgcatctacaag
attggggcaccgtccatcccagactcatgcttgccgctgggaatgtctcaggatgacacg
cagttaaagctggtccctgtgacaccagggcgtgatctcacatatcacgttttgagtgtg
agcagtgtggaggatggagacgaaggcgctagaaagagtatagtggagagccctgtgtgt
ggctttattgttgttacttatgtggacacgcaagcacaggtgatgaaagtgttgtcccca
gcacctagaccactgcccagacacacactgcttatcatggacatacgcttcatggacatg
aaatga
DBGET
integrated database retrieval system
