Monopterus albus (swamp eel): 109954939
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Entry
109954939 CDS
T05607
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109954939 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109954939 (cstf2)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109954939 (cstf2)
U7-dependent histone pre-mRNA processing factors
109954939 (cstf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
109954939
NCBI-ProteinID:
XP_020446286
UniProt:
A0A3Q3JF27
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MANVGAVAAVAASRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRET
GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIES
PYGDNVQPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALL
QAQVVMRIVDPEIALKMLHRQMTVQPLIPSGQGGGAPPVNPPPAQSSVPVSQPQPVPGMH
VNGAPQMMQPPNMGVVPGPMPGPGPGPGPVGPPGNLQHSPTGSSGQAAIDRPQGPGGIPP
RGLLGDGPNDPRGGTLLSVTGEVIDPNRPYMAAPPPHQAPPVHMAQMASGPPPDMRVPPM
DIRAAPMVEPRSMMGDPRGPPMMEPRAPPMEARGRDPRAMDARGPVNAQRVPMGAMQGPI
PHNMGPNAPPPARPGPGISGVPPSGGGFSPGQSQVSTQDQEKAALIMQVLQLTPEQIAML
PPEQRQSILILKEQIQKTASGAP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtaggtgctgttgcggctgttgccgcgagtagggacccagctgttgaccgt
tcattacgatcagtatttgtggggaacattccatatgaagctacagaagaacagctgaaa
gacatattttctgaagtcggacttgttgtcagtttcaggctagtatatgacagggaaaca
ggaaagccaaagggatatggcttctgtgaatatcaagaccaggagacggctcttagtgca
atgcgaaacctaaatgggagagagttcagtggtcgggctcttcgtgttgacaatgcagcc
agtgagaaaaacaaggaagaacttaaaagtttgggaacaggagcccccattattgagtct
ccctatggagataatgttcagccagaggaagccccagagtccatcagcagagctgtggcc
agcctgccaccagagcagatgtttgaacttatgaaacagatgaagttgtgtgtgcaaaac
agtccccaggaggcgaggaacatgctgctgcagaaccctcagctggcctatgctctgctc
caggcccaagtggtcatgcggattgttgaccctgagatagccttgaaaatgctccatcgt
caaatgacggtccagcctctgattcccagtgggcagggtggaggagcaccaccggtcaat
ccacctcctgcacagtccagtgtgcctgtgtctcagccgcagcctgtgcctggaatgcat
gtcaatggagctccgcagatgatgcagccccccaacatgggtgttgtccctggtccaatg
cctggacctggaccaggacctggaccagtgggacctccaggaaatcttcagcattctccc
acaggatcatctgggcaagctgctatcgatcgacctcaaggcccaggtggaatcccaccc
agaggcctgctgggagatggccctaatgaccccagaggaggaactctgctgtctgtcact
ggagaggtcatcgacccaaaccggccttacatggcagctccgccacctcaccaagcccca
cccgtacacatggcccaaatggcaagtggaccccctccagatatgagagtgcccccaatg
gacataagagccgcacccatggttgaaccacgaagcatgatgggagaccccagagggccc
ccgatgatggagccacgggcacctccaatggaagccagaggtcgtgacccaagggcgatg
gacgcccgtggacctgtgaatgcgcagagggttcccatgggagcaatgcaaggccctatt
cctcacaatatgggtccaaacgctcctccacctgcaagaccgggtcctggtatttctggt
gttcctccatcaggaggaggcttcagcccggggcagagccaggtctccacacaggaccag
gagaaggctgccctaatcatgcaagtcctgcagctgaccccagaacagattgccatgttg
cccccggagcagaggcagagcatccttatcctcaaagagcagattcagaagactgcgagt
ggggcaccctga
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