Monopterus albus (swamp eel): 109955017
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Entry
109955017 CDS
T05607
Symbol
cpsf3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109955017 (cpsf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
malb03021
]
109955017 (cpsf3)
03019 Messenger RNA biogenesis [BR:
malb03019
]
109955017 (cpsf3)
Transcription machinery [BR:
malb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109955017 (cpsf3)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109955017 (cpsf3)
U7-dependent histone pre-mRNA processing factors
109955017 (cpsf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
109955017
NCBI-ProteinID:
XP_020446429
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MATKRKIEVIVPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWLLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPSVKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRE
GRCLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKAININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLQLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDQVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KCVQGQRVSGILVKKNFNYHILNPSDLSTYTELAMSTVKQTQAIPFTGPYSLLVCHLRNL
TGDVEELDGTEKNTLKIFKNIILIHEVGMVVLEWIANPLNDMYADAITTVVLEVQSNPKA
QKVMETQSTIMDMDVFQSRLEVMLQDMFGEECVEFSDGKIITVTVDRKTLHICSETRSVC
YEDECTEDDSLREMVELAVQRLYDALNPIV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaacgcaagatagaagtgattgtgcccgccgaggaaagtgaccaactcctt
attcgccctcttggtgctggtcaggaagtcggaaggtcatgcatcatcctggagttcaaa
ggaagaaaaattatgctggactgtggcatccaccctggcttggagggaatggacgctctc
ccatacatagacttgattgacccagccgagatagatctactgctcattagccattttcat
ctggatcattgtggagctctgccttggctcctgcagaagaccagctttaaaggcaggacc
ttcatgacccatgccactaaggccatctaccgctggttactgtcagattatgtcaaagtc
agcaacatctctgcagatgacatgttgtacactgagactgacttggaagagagcatggat
aagattgagaccatcaatttccatgaggtcaaggaggtggctgggatcaagttctggtgt
taccacgctggtcatgtgcttggagctgccatgttcatgattgaaatagcaggagtcaag
ctgctttacacaggagacttttcccgacaagaggacaggcatctcatggcagcagagatc
cccagtgtcaaacctgacatcctaatcattgagtcgacctatggcactcacatccatgaa
aagagggaggagcgagaagctcgcttctgcaacacagtccatgacattgtcaatagagaa
ggtcgctgcttaatacccgtgtttgctttgggacgagctcaggagctgctgctcatcctg
gatgagtattggcagaaccacccagagctccatgatatccccatctattatgcttcatca
ctggccaagaagtgcatggctgtgtaccagacctatgtcaacgcaatgaacgacaagatc
cgcaaggccatcaatatcaacaacccgtttgtcttcaagcatatcagcaacctcaagagt
atggatcactttgatgacattggtcccagtgtggtgatggcttctccaggtatgatgcag
agtgggctgtccagagagctctttgagagttggtgcactgataagaggaacggagtcatc
atcgctggatactgtgtagagggcacactggccaagcacatcatgtctgagccagaggag
atcaccactatgtcaggccagaagctgcagctgaagatgtccgtggactacatctccttc
tctgcccacacagactaccagcagaccagcgagtttattagggcgctcaaaccaccacat
gtgattcttgtccatggggagcagaatgagatggctcgtctgaaggcggcactgatcagg
gagtatgaggataatgaccaggtccacattgaagtccacaaccctcgcaacacagaagct
gtcacgctgaatttcagaggagaaaaactggccaaggtgatgggctctctggctgacaag
aagtgcgttcagggtcaaagggtgtcaggcatacttgtgaagaagaacttcaactaccac
atcctcaatccttcagacttgtccacctacactgagctggccatgagcactgtgaaacag
actcaggccatccccttcactggaccttattcactgctcgtctgccacctaaggaatctc
accggtgatgtggaagaactggatggaaccgaaaaaaacactttgaaaatctttaaaaat
atcattctgatccatgaggttggcatggtggtgctggagtggatagctaatcctctgaac
gacatgtatgctgacgctatcaccactgtagtgctggaagtccagtcgaacccaaaggct
cagaaagtcatggagacccagagtaccattatggacatggatgtcttccaatcccggcta
gaggtcatgttgcaggacatgtttggagaagaatgtgtggagttcagtgacggtaaaatc
atcactgtgacagtcgacaggaagacgcttcacatttgttcagaaacgagatcggtgtgc
tacgaggacgaatgcacggaggacgactccctgagagagatggtggagctggcggtgcag
cggctctatgacgccctcaaccctatcgtctga
DBGET
integrated database retrieval system
