Monopterus albus (swamp eel): 109955388
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Entry
109955388 CDS
T05607
Symbol
npc1
Name
(RefSeq) Niemann-Pick C1 protein
KO
K12385
Niemann-Pick C1 protein
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
malb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
109955388 (npc1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109955388 (npc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
malb02000
]
109955388 (npc1)
Transporters [BR:
malb02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
109955388 (npc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
109955388
NCBI-ProteinID:
XP_020447171
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MGFLSGRSIFYTVFFVILLSEGHFRWVEAQHCVWHGECGESEKVPGKKYNCNYTGPPIPL
DRDAYELVTDLCPGYDYGNRSLCCDAAQLRTLKASLQLPYQFLSRCPACYFNLMTLFCEL
TCSSHQSQFMNATKINGRNVVEVQYYIGQTFANAMYNACKDVQAPSSNVKALSLLCGKDA
KDCNATNWIQYMFDINNGQTPFPIIPIFSDAPVSGYTPMNNKTYACTEGLEDGSGPCSCQ
DCTKACGPKPVPPPVPQPWTIFGVDAMTVIMWISYMAFLLIFMGAVLGAWCYRKRRIMSE
YGPIQDSNDPRSLNSDDSDQVNASCGETLGERFENALRILFSSWGSFCVRHPTLVILSSL
VLVGASAGGLAYMRITTDPVELWSSPTSQARQEKNYFDSHFGPFFRTVQLIITTPLSTGS
VYSPYPAGLDVPFTAILGKDILHQVLDLQLHIEDLVAIYEGQNVTLKDICVAPLAPYNDN
CTILSILNYFQNSHSVLDHSIGDEFFVFADYHSHFLYCVSAPASLNDTTLLHDPCLGTFG
GPVFPWLALGGYDETNYNNATALVITFPLNNYLNDSVRLGKALAWEKEFIKFMKNFRNPN
LTIAFSAERSIEDEINRESNSDISTIVLSYVIMFVYVSLALGHIHSCRRVMVDSKISLGV
AGILIVLSSVAASLGIFSYAGIPLTLIVIEVIPFLVLAVGVDNIFIIVQTYQRDERMPQE
ELHQQIGRILGDIAPSLFLSSFAETLAFFLGALSNMPAVRTFSLFAALAVFIDFLLQISC
FVSLLGLDAKRQESNRFDVVCCVTLPEGQETKTDGFFFWFFKKVYAPFILKEWVRPIVVA
VFVGMLSFSIAVVNKVEVGLDQKLSMPDDSYVLDYFKSMSKYLHTGAPVYFVVEDGLNYS
STEDQNVVCGGVGCNNNSLVQQVYEASLISNYTTIATTPSSWLDDYFDWVKPQSTCCRYY
NTTGAFCNASVVNASCVGCRPMTPSGKERPVGEDFMRFLPMFLSDNPNPKCGKGGHAAYA
SAVDLYPNNTGVGASYFMSYHTILKESPDFINALKNARTLANSISQVTNHKVFAYSVFYV
FYEQYLTIVYDTALNLSLSLAAIFVVTAVLLGFELWLAVIVSITIAMILVNMFGVMWLWD
ISLNAVSLVNLVMSCGISVEFCSHIVRAFSISMKKNRVERAEEALAHMGSSVFRGITLTK
FGGILILALSKSQIFQVFYFRMYLAIILLGATHGLIFLPVLLSYIGPSVNKAKVFAANQR
YAGTEKERLLNY
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggggttcttatccggaagaagcattttctacacagttttcttcgttatactgctgtca
gagggacattttcgatgggttgaagcccagcattgtgtgtggcacggtgagtgtggtgag
tctgaaaaagtgcctggaaaaaagtacaactgtaactacaccggtcctcccatcccgcta
gacagagatgcttatgaacttgtcacggacctttgtcctggatatgactatggaaaccga
agtctctgctgtgatgctgcccagttgcgaactctcaaagcaagtctccagctgccctat
cagttcctgtctcgctgtcctgcctgttacttcaatctgatgaccctcttctgtgagctg
acatgcagctcccaccaaagtcagttcatgaatgctaccaagatcaatgggcgtaatgtg
gtggaagtacagtactatattggacaaacatttgctaatgccatgtacaatgcctgtaag
gacgtccaagcaccgtctagcaatgtgaaggccttatcactgctgtgtggcaaggacgca
aaggactgcaatgctactaactggatccagtacatgttcgatattaacaatggacagact
cccttccctatcattccaatattctcagatgccccggtgtccggttacactcccatgaac
aacaagacgtatgcctgcaccgaaggcttggaggatggttcaggtccttgctcctgccag
gactgcacaaaggcttgtgggcccaaacctgtaccgccccctgtcccccaaccctggaca
atctttggtgttgatgcaatgactgtcatcatgtggatttcttacatggccttcttgctg
atttttatgggagctgtactgggagcttggtgttacaggaaaaggagaatcatgtcggag
tatggccccatacaggacagtaatgacccacggtctctcaacagtgatgattctgaccag
gtaaatgcatcgtgtggtgaaactcttggcgaacgctttgagaatgcactccggatcctc
ttcagctcctggggttctttctgtgtgcggcatcccactctggtcatactgagcagcctg
gtactggtgggagcctccgctgggggactggcctatatgcgcatcactactgacccagtt
gagctgtggtcgtctcccactagccaggctcgtcaagaaaaaaactactttgacagccac
tttggacccttctttagaactgtacagcttattataaccactccactcagtaccggttcc
gtgtactccccgtaccctgcaggattagatgtcccattcacagctatactgggaaaagac
atcctgcaccaggtgctggatctgcagcttcacatcgaagaccttgtagccatctacgag
ggccaaaatgtcaccctaaaggacatctgcgtggctccgctggccccatacaatgacaac
tgtaccatcttgagtatcctcaactacttccagaacagccactctgtgctggaccacagc
ataggagatgaattctttgtatttgctgactatcacagccacttcctctactgtgtcagt
gcgccagcgtccctcaacgacaccactctcctgcatgacccttgcttaggcacctttggt
ggccccgtcttcccttggctggcccttggtggttacgatgaaacaaactacaacaatgcc
acagctcttgtgatcacctttccactcaacaactacttgaatgactcggttaggctggga
aaagctttggcatgggagaaggaattcatcaagttcatgaaaaacttcagaaaccccaac
ctgaccatagccttcagtgcagagaggagtattgaagatgaaatcaacagagaaagcaac
agcgacatcagcaccatagtactcagctatgtcattatgttcgtctacgtctccctggcc
ctgggtcacattcacagctgcaggagagtgatggtggattccaagatctccctgggtgta
gcaggaatccttatcgtgctcagctccgttgccgcctcactagggatcttcagctatgct
ggtatccccctcaccctcattgtgattgaggtcattcctttcctggtgctggctgttgga
gtggacaatatctttattatagtacagacatatcagcgggatgagaggatgcctcaggag
gaacttcaccagcagattggtcgtattcttggagacatagctcctagcttgttcctctcc
tcttttgctgagacactggccttcttcctgggagccttgtcaaacatgcctgcagtgagg
acgttctctctgtttgctgctttggctgtctttattgatttcctgctgcagatcagctgc
tttgtcagcttgctcggcttggacgctaaaagacaggagagtaatcggtttgacgtcgtc
tgctgtgtgacactgcctgaaggccaggaaacaaagacagatggcttcttcttctggttt
ttcaagaaagtctatgctccattcatcctcaaagagtgggtgcgaccaatagtagtcgca
gtgtttgtaggaatgctatcgttcagtattgctgtggtgaataaagtagaggttggactg
gaccagaaattatccatgcctgatgactcgtacgttctggactactttaagagcatgagc
aagtatctccacactggagctccagtgtactttgtggtagaggatggtctcaattacagt
agcacagaggaccagaatgtggtgtgtggaggggtgggctgcaacaacaactctctggtt
cagcaagtctatgaagcctcactcatcagcaattacacaaccattgctaccacaccgtct
tcctggctagatgactactttgactgggtgaagcctcagtccacctgctgtcgatactac
aacaccactggagccttctgcaatgcatcagtggtcaacgcatcttgtgtgggctgtcgg
cccatgactcctagtgggaaggagaggcctgtaggagaagacttcatgcggtttttaccc
atgttcctgtcagacaatcccaaccccaagtgtgggaaaggcggccatgcagcctacgct
tcagcagttgacctgtatcccaacaacacaggggttggagcctcttattttatgagctac
cacaccatactgaaggaatccccagacttcataaatgctttgaaaaatgcacgaactctg
gctaacagtatcagtcaggtcacgaaccacaaagtttttgcctacagtgtcttctatgtg
ttttatgagcagtacctcaccattgtgtacgacaccgctctgaacttaagtctgtcactg
gcagccatatttgtggtaacggcagtgttgttgggttttgagctgtggttagctgtgatc
gtcagcattaccatcgctatgatcctggtcaacatgtttggcgtcatgtggctgtgggac
atcagcctgaatgcagtatccctcgtcaacctagtcatgagttgtggtatctctgtagaa
ttctgcagtcatattgtgcgagctttttccatcagcatgaagaaaaaccgagtggaacgg
gctgaggaggctctagctcacatgggcagctccgtgttccgtggaatcacattaacaaag
ttcggcggtatcttaattctggcgctttccaagtcacagatcttccaggtcttctacttc
aggatgtacttggcgataatcctgctgggtgccacacacggcctcatcttcctccctgta
ctgctcagctatataggtccttcagtgaacaaagcaaaggtgtttgctgctaatcagcgc
tacgcaggtacagaaaaggagcgcctcctcaactactag
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integrated database retrieval system
