Monopterus albus (swamp eel): 109955479
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Entry
109955479 CDS
T05607
Symbol
vim
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109955479 (vim)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109955479 (vim)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
malb04812
]
109955479 (vim)
04147 Exosome [BR:
malb04147
]
109955479 (vim)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
109955479 (vim)
Cytoskeleton proteins [BR:
malb04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
109955479 (vim)
Exosome [BR:
malb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109955479 (vim)
Exosomal proteins of other cancer cells
109955479 (vim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
KIF21A_4th
Myosin_tail_1
FKBP15
DUF7491
TolA_bind_tri
CCDC39
DUF1664
TPR
Motif
Other DBs
NCBI-GeneID:
109955479
NCBI-ProteinID:
XP_020447318
UniProt:
A0A3Q3KJH5
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MSYRSAPHSSYKKMFGGERTTVRTSSTRQFSSPVRSRVSFGLSSTPTIYAAKTHRFRSSV
AMPRLASDNLDFSLSDAINSEFITNRTNEKAQMQSLNDRFANYIEKVRFLEQQNKILLAE
VEQLRGKGTSRVGDLYEDEMRDLRRQVDQLTNEKARVEVHRDNLADDIGRLREKLQDEIS
QREEAEANMQSFRQDVDNAALARLDLERKVESLQEEINFLKKLHDEEMLELQNQVHQQQH
VQVDMEIAKPDLTAALRDVRLQYENLASKNIQESEEWYKSKFADLTEAAAKNNDALRLAK
QEANDYRRQVQSLTCEVDALKGTNESLERQMREMEENFSLETSGYQDTIGRLEEDIHNMK
DEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISTPLPNFSSLNLRETMIDSKPH
IETTTGKKVLIKTIETRDGQVINESTQNHSDMEQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcttataggtcagctccacattcctcttataaaaagatgtttggtggggagaggacc
acggtcaggaccagctccacccgccaattctccagcccggtgcggtcccgggtatctttc
ggtctctcctccaccccgaccatctacgcagcgaagacccacaggtttcgtagcagcgta
gccatgccccggctggcctccgacaacttggacttctcactgtccgacgccataaacagc
gagttcatcacgaaccgcaccaacgagaaagcgcagatgcagtcgctcaacgaccgtttc
gccaactacattgagaaggtccgtttcttggagcagcagaacaagatcctgctggcggag
gtggagcagctgcggggaaaaggcacatctcgggttggagatctgtacgaggacgagatg
cgggacctgaggcgccaggtggaccagctcacgaacgagaaggcccgggtggaagttcac
cgggataacctggccgacgacatcggcaggctgagagagaagctgcaggatgagatatcc
cagcgggaggaggctgaagcaaacatgcagagcttcaggcaggacgtggacaatgctgcc
ctcgccagactggaccttgagcgaaaggtagagtcactccaggaggagatcaacttcctc
aagaagctgcatgatgaggagatgctggagctacaaaaccaggtccaccagcagcagcat
gtgcaggttgacatggagatagctaaacctgaccttacagcagctctgagggacgttcgt
cttcagtatgaaaacctggcctccaaaaacatccaggagtcggaggaatggtacaaatcc
aagtttgctgacctcactgaagctgcggccaagaataatgatgctttgagactggccaag
caggaggccaatgactatagacgccaagttcaatcacttacatgtgaggtggatgctctc
aaaggaactaatgagtccttggagcgccagatgagagagatggaggagaacttctccctg
gagacaagcggttaccaggacaccattggccgtctggaggaggacattcacaacatgaag
gacgagatggcccgtcacctccgggagtaccaggacctcctaaatgtcaagatggccctg
gacattgagattgccacctataggaagctgctggaaggagaggagagcagaatctccacc
ccactgcccaacttctcctctctaaacctgagagaaacaatgattgattccaaacctcat
attgaaaccacaacaggcaaaaaggttctcatcaagacgattgagaccagggacggtcag
gtgatcaatgaatcaacccagaaccacagtgacatggagcaatag
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