Monopterus albus (swamp eel): 109955813
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Entry
109955813 CDS
T05607
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03013
Nucleocytoplasmic transport
malb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109955813 (upf3b)
03015 mRNA surveillance pathway
109955813 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109955813 (upf3b)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109955813 (upf3b)
mRNA cycle factors
P-body specific factors
109955813 (upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
109955813
NCBI-ProteinID:
XP_020447987
UniProt:
A0A3Q3IZM1
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MKEDKENARPKEKRVEIKCEDGEKTEKSKEKKEAMTKIVIRRLPPNLTKEDLEEQLQPLP
EVEYLEFFSNDTSLYPHLFARAYISFKNQEDIVLFRDRFDGYVFIDHRGQEYPAIVEFAP
FQKTAKKRTKKKDGKCGTIIEDPDYKKFLEYYNGDEEKLTSTPETLLEEIEAKSKELVAK
KTTPLLDFLKNKQRLREEKKEEKRRREFERKRLREEERRKWREEERKKRKEAEKMKRLEK
TLDKERDQVKEEPKIKLLKKPDKSDEGNSEKPKEKAKKPEKPNKEDRSMGSADHKRRQNT
ENKEDRGRKVDEDRRKEFRERDTDRDREREREREKERRQKEKERIRRQDEERRRRRERQD
GENTCRKREEEVKKEKEHALEKKKSENIGEFFPSESLEKPIKDNKKEESGKRERLRNKDR
PAIQLYQPGARSRNRVAGGGAATESNSVDRNTETKKVADKVDD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagataaagaaaacgctcgacctaaggagaaaagggtggaaataaaatgtgaa
gatggggaaaagacagagaagtccaaggaaaagaaagaggccatgacaaagattgtgatc
agacgattaccaccaaatctgaccaaggaggatttggaggaacagttacaaccgctccca
gaggtggaatacttggagtttttctccaatgacaccagcctttaccctcacctctttgca
agggcttacatcagtttcaaaaaccaagaggatatagtcctcttcagagatcgatttgat
ggatatgtattcattgaccacagaggacaggaatatcctgctattgtggagtttgcgccc
tttcaaaagactgccaagaaaagaactaagaaaaaggatggaaaatgtggaacaataatt
gaagatcctgattacaagaagttccttgaatattacaacggagatgaagaaaaactgaca
tctacacctgagaccctcttggaggagattgaggcaaaatcaaaggaacttgtagctaaa
aaaacaactcctctgctagacttcctgaagaacaaacagagactcagggaggaaaagaaa
gaagagaaaaggaggagggagtttgaacgcaagcgtctgcgagaagaagaacgtcgtaag
tggagggaggaggagagaaagaagcgtaaagaggctgagaagatgaagagacttgagaaa
acattggacaaagagagagaccaagttaaagaagaaccaaaaattaagctcttgaagaag
ccagacaaaagtgatgaaggtaattctgagaagcccaaggaaaaggccaagaaaccagag
aagccaaataaagaggacagatccatggggagtgctgatcataagaggcgtcagaacact
gaaaataaggaggatcggggaaggaaagtggatgaagacaggcggaaggagttcagggag
cgtgacacagatcgagacagagagcgtgaacgagagcgggagaaggagcggcggcagaaa
gagaaggagcgcatcaggcgacaggatgaagagaggaggagaaggagagagcggcaggat
ggagagaacacgtgcaggaagcgggaggaggaggtgaaaaaagaaaaagagcatgccttg
gagaagaaaaagagtgaaaatatcggagaattctttccctctgagagcctggagaagccc
atcaaagacaacaagaaggaggagagtggtaaaagagagaggctacgaaataaggaccgg
cctgctattcagctgtaccagccgggggccagaagccgcaatcgagttgcaggaggagga
gcagctacagaatccaactcagtggacaggaatactgagactaagaaagtggctgacaaa
gtagatgattga
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