Monopterus albus (swamp eel): 109956161
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Entry
109956161 CDS
T05607
Symbol
pdzrn3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
malb04121
]
109956161 (pdzrn3)
Enzymes [BR:
malb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109956161 (pdzrn3)
Ubiquitin system [BR:
malb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
109956161 (pdzrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Prok-RING_4
PDZ_Tricorn
Sina_ZnF
zf-TRAF
U-box
zf-rbx1
zf-RING_6
IBR_1
TRAF3_RING
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
109956161
NCBI-ProteinID:
XP_020448727
UniProt:
A0A3Q3JFG3
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MGFELDRFKGTVDPDFKCNLCNKVLEDPLTTPCGHVFCSGCVLPWVVQQSSCPVKCQRIS
TKELNHVLPLKNLILKLEIKCDNHARGCDAVVKLQHLAEHAEMCDYSPAKCRNRGCNEVL
NLRDMDAHMRETCDYRPVGICESGCGLMLTHKEQKLNSHCCLRALKAHNSALQCKVICLD
REFKKQTIKANKREKSLLAQLSAVHSELQMTALKYQKKFTEYSERIDSLTQTVAFSCKES
ETKNLMVILLREGGSLGFNIIGGRPCVDDNDSTSNEGIFVSKIVENGPADKEGGLQIHDR
IIEVNGKDLSKATHDQAVETFRTAKEPIMVQVLRRDPLSKLLSPAVDTQVSDISTQTDIT
LQHIMALTTLPPFSPHMTELEEYLLPEEHPPGHAYFDPSDFLEGIQQDIEREELEYEEVD
LYRANIQDKLGLTICYRTDDEDEAGIYISEIDPNSIAAKDGRIREGDKIVQINGVEIQNR
EDAVALLTSEGNQNISLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEQQHHQAMQFTAS
MLQQKKHEEDGGTTDTATLLSNHHEKDSGVGRTDESTRNDESSEQENLGDDQTTASNTLG
SCRKLTYSQDTLGSTDLPFGSESFISADYTDADFLGIPADDCERFRELLELKCQMRSSGA
RGLYCQGIGAEGQDQEGVDKELELLNEELRTIELECLNIVRAHKMQQLREQCRESWMLHN
SGFRNYNTSIDARRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLRRGA
ESQGTAGPSGSISSNGRMLKPLLSPVQEACGPSQSRASSKDTDGALQAMGKERKLGESIK
YGRSFAQPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCRDPITPSDLE
PKMEWKVKIRSDGTRYITKRPVRDKLLRERALRIHEERSGMTTDDDAISELKMGRYWSKE
ERKQHAVRAKEQRQRREFMKQSRADCLKEQTGPEDKKEPNIIELSHKKMMKKRNKKIFDN
WMTIQELLTHGTKSPDGTRVYNSLLSVTTV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagcttgaccgcttcaaggggaccgtggacccagatttcaaatgcaacttg
tgcaataaagtcttggaggacccgctgacgactccgtgcggccacgtcttctgctctggc
tgcgtgttgccctgggtcgtccagcagagcagctgtcccgtcaaatgtcagcggatctcc
accaaagagctgaaccacgtcctgcctctaaaaaacctcatcctgaagctggagatcaaa
tgtgacaaccacgccagaggctgcgatgcggtggtaaaactgcagcatctggccgagcac
gccgaaatgtgtgactactccccggcgaagtgcaggaatagaggatgcaacgaggtgctc
aacctgagggacatggatgctcatatgcgggagacgtgcgactacagaccggtggggata
tgcgagagcggctgcggattgatgctcactcataaagagcagaaattaaacagccactgc
tgcctgagagccctgaaggcgcacaacagcgcgctgcagtgcaaagttatttgcttggat
agagagttcaagaagcaaactattaaagccaacaaaagagagaagtcactcctggcacaa
ctttccgccgtgcacagtgagctgcagatgacagcgctgaaatatcagaagaaattcacc
gagtacagcgagaggatcgactccctcacccagaccgtggctttctcctgcaaggaaagc
gagactaaaaacctgatggttatccttctacgtgagggtggatctctgggttttaacatc
ataggaggaaggccgtgcgtggatgacaacgacagcacttcaaatgaagggatctttgtg
tccaagattgtcgagaatggtccagccgacaaggaaggaggtcttcaaatccatgacaga
ataatagaggtcaatggcaaggatctgtccaaggccacccatgaccaggcagtggagacc
ttccgcaccgccaaagagcccatcatggtccaggttctgcggcgggacccgctctccaaa
ctgctcagtccagccgttgacacccaggtctcggacatcagcacccagacggacatcacc
ctccagcacatcatggcccttaccacactgcctcccttttcaccccacatgacagaactg
gaggagtacctgcttccagaggagcatcctcctgggcatgcatactttgaccccagtgat
ttcctggagggcatacagcaggacatagagcgtgaggagctggaatatgaggaggtggat
ttgtaccgagccaatattcaagacaagcttggcctgacgatctgttacaggaccgatgat
gaggatgaggctgggatctacattagtgagattgatccaaacagcattgctgcaaaagat
ggcagaattagagaaggggacaaaatcgtccagatcaatggtgttgagatccagaaccgg
gaggatgctgtagcactgctgaccagtgaggggaaccagaatatatctctgctggtggcc
agaccagagatccagctggatgagggctggatggatgatgacaggaatgacttcctggat
gacctccacatggacatgctggagcagcagcaccatcaggccatgcagttcactgccagc
atgctgcagcagaagaagcatgaggaggatggaggtaccaccgacacagccacactcttg
tccaaccaccatgagaaggacagcggggtgggtcgcactgatgagagtacgcgaaacgac
gagagctcagagcaggagaaccttggtgacgaccagaccacggcctccaacacgctgggc
agctgcaggaagctgacctacagccaggacaccctcggcagcaccgacctgccctttggc
agtgaatcattcatatcggctgactacacagatgctgacttcctgggcatcccggctgat
gactgcgagcgcttcagagaactcctggagctgaagtgccagatgaggagcagtggagcc
cggggtctgtactgtcagggtattggagcagaaggacaggaccaagagggtgtggacaaa
gagctggagttgctaaatgaggagctgcgcaccattgagctggagtgcctgaatattgtt
cgtgctcacaagatgcagcagctgagggagcagtgccgtgagtcctggatgctccacaac
agcggattccgcaactacaacaccagcatcgacgcacgccgccatgaactctcggacatc
acagagctaccagagaaatcagacaaggacagctccagtgcctacaacacaggagagagc
tgccgcagcacccctctgactctggagttgtctccagacaactcactgcgccgaggagca
gagagccagggtacagctgggccatcgggctccatcagttccaacggcaggatgctcaaa
cccctcctgtcccctgtccaggaagcttgtggccccagccagagcagagcctcctccaag
gacacagatggagctctgcaggcaatgggcaaggagaggaagctcggggagtcgattaag
tatggtcggagctttgcccagccacactcaccttacaagcatgcccacatccctgcccac
gcccagcactaccagagctacatgcagcttatccagcagaaatcagctgtggagtatgcc
cagagccagatgagcctggtcagtatgtgccgggaccccatcacccccagcgacctggaa
cccaagatggagtggaaggtgaagatccgcagcgacggtacacgctacatcaccaagcgg
cctgtccgggacaagctgctgagggagcgtgcgctccgcattcacgaggagcgcagtggt
atgaccacagatgacgatgccataagtgagctgaagatgggccgctactggagcaaggag
gagaggaagcagcatgccgttcgtgccaaggagcagaggcagcggcgcgagttcatgaaa
cagagccgagccgattgtctgaaggagcagactggcccagaggacaaaaaggagcccaat
atcatcgaactcagccacaaaaagatgatgaaaaagaggaataagaaaatatttgacaac
tggatgaccatccaggaacttctgacccatggtaccaagtcaccagacggcaccagggtt
tacaactcactcctgtctgtgaccacagtctaa
DBGET
integrated database retrieval system
