Monopterus albus (swamp eel): 109956992
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Entry
109956992 CDS
T05607
Symbol
pole
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03030
DNA replication
malb03410
Base excision repair
malb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109956992 (pole)
03410 Base excision repair
109956992 (pole)
03420 Nucleotide excision repair
109956992 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
malb03032
]
109956992 (pole)
03400 DNA repair and recombination proteins [BR:
malb03400
]
109956992 (pole)
Enzymes [BR:
malb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109956992 (pole)
DNA replication proteins [BR:
malb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
109956992 (pole)
DNA repair and recombination proteins [BR:
malb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
109956992 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
109956992
NCBI-ProteinID:
XP_020450182
LinkDB
All DBs
Position
Unknown
AA seq
2284 aa
AA seq
DB search
MVLQNSGRYRADRGQSGGDQENQDDGSSMSALKRLERSQFTEEMDSRFGFDRMKEPGEKT
GWLINMHPVEILDEDKRMISAVDFYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYL
SKKFQGKVAKLETLAKEDLDLPNHLVGLKRTYVRLSFNTVDDLIKVKREIAPAVRKNRER
EQANDAYTSMLSSALSGGNVTSADEDGMSKSILDQLDNIVDMREYDVPYHVRVSIDLKIH
VAHWYNVRYRGSAYPPEIIQRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYDGPFTVFNEDDEAALIKRWFDHIQETKPNIF
VTYNGDFFDWPFIEARATLHGLSMHREIGFQKDSQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHVNIVFPNKQEQVFNKLTDDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMHHAIEEEEKIPLEQVTNFNEV
CNEIKTKLNSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHTLSREEQAKHE
KKRLSDYCRKAYKKIHVTRLEERITTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SLAQDSGDAAEAKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNI
MVKEGFTNDQYHELIDPASLTYNTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYS
KAANMPDAELFDLISENRSMSRKLEDYGDQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKINEMFTSEGKRQVACQP
FDAGQTADIEDFGMPARPLQPAILISTKRKRASQGEESQVESQDVELTQSWREILGPPPP
MGSTREGRLVWLRYHKKKWXRKERKKRRRLLDGEAQPVGGGVIRDGPMTGLGSFLRRTAR
SILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRIFYVNQKVPKQEEGATYKKV
NRMLPRSNMVYYLYEYCVPEDMYQENINEINADLSAPDIEGVYETQVPLLFRALVQLGCV
CMVNKHGVRDLAGREADTYDLEQLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALFGLFI
PSQRKASIFVLDTVRSNQMPNLSNVYTAERTALLERTTEELLPPEKHNFEVRAENDIKTI
YRALQRTLLNYKVKYTVPIECFVXXXXXXRRLATGMPVFEEFPVVPVHVVDEISYNMLDW
QRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKHNHLL
WLSPTARPDLGGKEVDDSRLVMESDDKCSVEINAQGCYSTACVELDLQSLAVNTILQSQH
VNDMEGGASLGISFDVIQQASLEDMMSGNQGASTLASYDETALCSNTFRILKSMVVGWVR
EITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLYNMMKKVFFQLVAEFKRLGSTVV
YGNFNRIILCTKKRKIDDAIGYIDYITNSIHSREIFHSLSISFSRCWEFLLWMNPANYGG
VKGKLPSSLLNGEEGAKQKNNRQEGGDEDDSEYEDEAEANVEEDDGETDEVEELIESNWN
IMQYLPQTASCQKYFLMIVSAYIAAIYHSMREELRRNAPGATPVKRRGGSQVSQQAAGDL
SALPGMISFSQEYVASELTQNVFTITQKIQKKVTGTRSVTQPSEMFPILPGSHLRLNNPA
LEFIKYVCQVLSLDVNIVNQVNKLKRDLLRLVDVGEFSEEALFRDPCNSYILPEVICHHC
NFCRDLDLCKDPSMAQDGSVLPQWFCSNCLTQYETESIEMALVEALQKKLMSYTLQDLVC
TKCKGVKEANMNLYCGCAGDFDLTFSAKGFSEQITVFQNIASHYNMSFLKETIDWLLAMS
PQIS
NT seq
6855 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcaaaacagtggacgttacagagccgaccgaggacaaagtggaggagatcag
gaaaaccaggacgatgggtcctcgatgtcagctctcaagcggctggagcgcagccagttc
accgaggagatggactcccgctttggtttcgacaggatgaaggagccgggtgagaaaaca
ggctggctgatcaacatgcatccagtagagatcctggatgaagacaagaggatgatcagt
gctgtggacttttatttcattcaggaggatggaagcaggtttaaggtggctctgcccttc
aagccctatttttacattgctactaaaaagaactgtgagagagaagtcatctcatacttg
tctaagaagttccaagggaaggtggcaaagcttgaaacccttgcaaaagaggacctagac
ctgccaaaccatctagttggactgaagagaacctacgtcagactgtctttcaacaccgtg
gacgacctcatcaaagtcaagcgtgagatcgccccggcggtgcgcaagaaccgagagagg
gagcaggccaacgacgcctacacatcaatgttatcaagtgccttatcaggtggcaacgtt
acctcggcagacgaagacgggatgtcaaagagtattttagaccagttagacaacatagtg
gacatgagagagtatgatgtgccctatcatgtgcgtgtgtccatcgatctcaagatccac
gtggctcactggtacaacgttcgatacagaggcagtgcttacccaccagaaataatacag
agagatgaccttgtggagcgaccagacccagttgttttggcgtttgacatcgagaccaca
aaactgccactaaaattcccagatgcagagacagatcagattatgatgatctcctacatg
atagatggacagggatttctcatcacgaaccgagagattgtctctgagaacattgaggat
tttgagttcactcccaagcctgaatatgatgggccttttactgttttcaacgaggatgat
gaggcagcccttatcaagaggtggtttgatcacattcaagaaacaaagccaaacatcttt
gtaacatacaatggagacttctttgactggccttttattgaggctcgggccacccttcac
ggactgagcatgcacagggagattggtttccagaaggatagtcagggagagtacaagtcc
agtcaagccattcacatggactgcttaaggtgggtgaaaagagacagctacctgccggtg
ggaagtcataatctgaaggctgcagcaaaggctaaactgggctacgacccagtggagctg
gacccagaggagatgtgccgcatggcaactgaggagccacagactttagcaacatactct
gtgtcagacgctgtggccacgtattacctctacatgaagtatgtccatcccttcatcttt
gctctgtgtacgataatccccatggagcctgatgaggttctgcgtaaaggttctgggact
ctgtgtgaagccctgctcatggtgcaggccttccacgtcaacattgtattccccaacaag
caggagcaggtcttcaacaagctcacagatgatggccatgtcctggactctgagacctat
gtgggtggccacgtggaggcgctggagtctggagtctttcgtagtgacatcccctgccgt
ttcaaaatgaacccagctgcatttgacttcttgttgcaaagagttgagagaacgatgcat
catgccattgaggaagaagagaaaatccctttggaacaagtcacaaactttaatgaagtt
tgcaacgagatcaaaacgaagctgaactccctgaaggaggttccaaacaggatcgaatgc
cccctcatctaccatctggatgttggggcaatgtaccccaacatcattctcaccaaccgc
ctgcagccatcggctatggttgatgaggccacttgtgctgcctgtgactttaacaaacct
ggtgccacctgccagaggaggatgacctggcaatggagaggggaaatcatgcctgccagc
cgcagcgagtttcaccgcatccagcagcagcttgagtctgagaagttcccgccgttgttc
cccaatggtccacctcgcgccttccacacactcagcagagaggagcaggccaaacatgag
aagaaacgtctgtcagactattgtaggaaggcctacaagaaaatccacgtgaccaggctg
gaggagcgcatcaccaccatctgtcagagagaaaactccttctatgttgatactgtgaga
gcgtttagagatcggcgttatgaattcaaaggactccacaaggtatggaagaagaagctg
tccttagctcaagacagcggagatgctgctgaggcgaagcgctgcaagaacatggagatc
ctgtacgattctctgcagctggctcacaaatgtattcttaactctttctacggttacgtc
atgaggaaaggggcgcgttggtactcaatggagatggctggcattgtgtgctacactgga
gccaacatcatcactcaggccagggagctcatcgaacaaatagggaggcctcttgagttg
gacaccgatggcatctggtgtgtcctccccaacacctttcctgagaactttgtggtgaag
accagtaacgagaagaaaccaaaggtgaccatctcctaccctggagcgatgctgaacatc
atggtgaaggagggattcaccaatgatcagtaccacgagctgatcgaccccgcatccctc
acatacaacaccaggtccgagaacagtatcttcttcgaggtggatggaccgtacctggcg
atgatactgcctgcctcgaaagaggaagggaagaaactgaagaagaggtatgctgtgttt
aatgaggatggttctctggctgagctgaaggggtttgaagtgaagagaagaggagagctc
cagcttattaagatttttcagtcatctgtttttgaagctttcctcaaaggtaccactctg
gaggaagtgtacgcctctgtggccaaagtggccgactactggctggacgttctgtacagt
aaggctgctaacatgcctgatgcggagctgtttgacctgatttctgagaatcgttcaatg
tccagaaagcttgaggattacggagatcagaagtccacttctatcagcacagctaagaga
ctggcagagttcctgggagaccagatggtcaaagatgctggtctgagttgccgctacgtc
atctccagaaaaccagaaggttcccctgtcacagagagagccattcctctagccatcttc
caggcggagcccagtgtgaagaagcatttccttcggaagtggttgaagatgcccagcctg
catgacttggacatccgctctatccttgattggagttattacatagagagattaggtagt
gccattcagaaaattatcaccatccctgcagctctgcaacaggtgaagaatccagtgccc
agagtgaggcatcctgactggcttcacaagaaactactggaaaaaaatgatatctataag
caaaagaaaatcaatgagatgtttaccagtgagggcaagagacaggtggcctgccagcct
tttgatgcaggccagactgcggacatagaggactttgggatgccagccagacctctgcag
ccagccatcctcataagcaccaagcggaagcgggcatctcagggagaggaaagccaggtg
gagtctcaggatgtcgagctcacccagtcctggagagagatcctggggccaccgccacct
atgggctcaacacgggaggggcgtctggtgtggctgcgctaccataagaagaagtggnng
aggaaggaaagaaagaagaggaggaggctgctagatggtgaagctcaacctgtagggggg
ggagtgatcagagatggccctatgactggcttgggaagtttcctccgcagaaccgcacgc
agcatccttgacatgccatggcaaattgtgcagattgcggagactagtcatcctggtctg
tacaagctgtgggctgtgattggaaatgatctgcactgcatgaagctcaacatcccacgt
atcttctatgtcaatcagaaagtcccaaaacaggaggagggagccacgtacaaaaaggta
aaccgcatgttgcctcgctccaacatggtgtactacctttatgagtattgtgtaccagag
gacatgtaccaggaaaacatcaatgagatcaatgctgacctctctgcaccagacatcgaa
ggggtctatgaaacacaggtccctttgctgtttcgagcactggtgcagctcggatgtgtg
tgcatggtgaataaacatggtgtgagggatctggccggcagagaggctgacacttacgac
ctggagcagctggagatgaggtctctggcccagttcagctacctggaacctgggagtgtt
cgccacatgtacctgtatcaccacagccagggtcacaaggctctgtttggcctgttcatc
ccctcacagcgcaaagccagcatctttgtcctggacacggttcgaagcaaccagatgccc
aaccttagcaatgtctacacagctgaacgcactgctctcctggagaggacaactgaggag
ctcctgcctccagagaaacacaactttgaagttcgagctgaaaatgacataaagacgatc
taccgcgcactgcagcgcacactgctaaactacaaggtgaaatacactgttcctatcgag
tgctttgtnnnnnnnnnnnnnnnnntgcggcggttggcaacagggatgccagtcttcgag
gagttcccagtcgttcctgtacatgtggttgatgagatcagctacaacatgctggactgg
caacgccatggtgcccggcgcatgattcgccactacctcaacctggacagctgcttgtca
caagcttttgacatggccaggtattaccacttacctgtaggaaacttgcctcaggatgtg
tccatctttggctcagatttatttctggcaagacatctacggaaacacaaccacctgctg
tggctttcccccacagccaggcctgacctcggaggaaaagaggttgatgacagtcgtctg
gtcatggaaagcgatgacaaatgctccgtggagatcaatgctcaaggatgctattccaca
gcatgtgtggagctggacttgcagagcctggcggtgaacaccatcctccagtcgcagcat
gtcaatgacatggaaggtggagccagtttgggaatcagctttgatgtgatacagcaggca
tcgctggaggatatgatgtcaggaaaccaaggagcaagcacgctggctagctatgatgag
actgctctctgctccaacaccttcaggatcttgaagagcatggtggttggatgggtcaga
gagatcactcaataccacaatgtgtatgcagacaatcaggtgatgcacttctaccgctgg
ctgcgctccccgagctctctactttacgaccctgcactgcaccgaaccctgtacaacatg
atgaagaaggtctttttccagttggttgcagagttcaaacgtcttggctcaactgtggta
tatggaaacttcaataggattatcctgtgtactaagaagcggaaaatagatgatgcaatt
ggctacatagactacatcaccaacagcatacactcgagagaaatcttccactcattgtcc
atctccttctcccgatgctgggagttcttgctgtggatgaacccggccaactacggcggt
gtgaagggaaaactgccttccagcctcttgaatggagaggaaggagccaaacagaagaat
aacagacaagagggtggagatgaggatgacagcgagtatgaagatgaggctgaagccaat
gttgaggaagatgatggagagacggatgaggtggaggagctgattgagagcaactggaac
atcatgcagtatctgccccaaacagcctcctgtcagaaatactttctaatgattgtgtca
gcctatattgcagccatctaccacagcatgagagaggagctgaggcgtaatgctcctgga
gcaacaccggtcaagagacgtggaggcagccaggtttcccagcaagcagcgggggatctg
agtgctcttcctggaatgatctccttctcccaagaatatgtggccagtgagctgacccag
aatgttttcaccatcactcagaaaatccagaagaaggtgacaggtaccaggagtgtcacc
cagccctctgagatgttccccatcctgcctggttcacacctacgactcaacaacccagca
ctggagtttattaaatatgtctgccaggtgctgtcattggatgtcaatatagtgaatcag
gtaaacaaactaaagagagacctcctgcgtcttgtggacgtcggagagttttcagaggag
gccctgtttcgtgacccgtgtaactcctacatcctgccagaagtcatctgccaccactgt
aatttctgtcgtgacctcgacctctgcaaggacccgtctatggcacaggatggctctgtc
ttacctcagtggttctgctccaactgcctgacccagtatgagactgagtctattgagatg
gctctggtagaagcgctgcagaagaaactgatgagctatacactgcaggacctggtctgt
accaaatgtaaaggggtgaaggaagcaaacatgaacctctactgtggatgtgctggagac
tttgacttgaccttctcagctaagggcttctctgagcagatcacagtgtttcagaatata
gcatctcactataacatgagcttcctgaaggagaccattgactggctgctggcgatgagt
ccacagataagctag
DBGET
integrated database retrieval system
